RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 AGTP01019 485 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 TNFP01375 233 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 THRAP10827 490 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 CYP2A6P11509 494 aaPredicted RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 TPSB2P20231 275 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 VARSP26640 1264 aaKnown RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 CHRNA4P43681 627 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 LEPRP48357 1165 aaKnown RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 ITGA8P53708 1063 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 ELP6Q0PNE2 266 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 SQSTM1Q13501 440 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 OLIG2Q13516 323 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 IRF4Q15306 451 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 TPSAB1Q15661 275 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 NADK2Q4G0N4 442 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 TAF8Q7Z7C8 310 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 TTC7BQ86TV6 843 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 C17orf82Q86X59 251 aaPredicted RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 APLFQ8IW19 511 aaPredicted RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 BLOC1S5Q8TDH9 187 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 MRGPRX2Q96LB1 330 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 GORASP1Q9BQQ3 440 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 ZPBPQ9BS86 351 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 PIH1D1Q9NWS0 290 aaKnown RBP14.31□□□□□ -0.12
USP11-207ENST00000478596 SHOC2Q9UQ13 582 aa14.31□□□□□ -0.12
USP11-207ENST00000478596 ZNF106Q9H2Y7 1883 aaKnown RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 HTRA2O43464 458 aaPredicted RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 MMP20O60882 483 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 PDHA1P08559 390 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 PIRTP0C851 137 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 ALDH4A1P30038 563 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 STAT5AP42229 794 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 GPR3P46089 330 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 SESN2P58004 480 aaPredicted RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 RPL26P61254 145 aaKnown RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 CDK16Q00536 496 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 CDH17Q12864 832 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 KCNJ11Q14654 390 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 MORF4L2Q15014 288 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 SLC1A5Q15758 541 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 ANKRD22Q5VYY1 191 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 DENND2CQ68D51 928 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 CASC4Q6P4E1 433 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 GLT6D1Q7Z4J2 308 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 HOOK3Q86VS8 718 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 FAM129CQ86XR2 697 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 NRSN1Q8IZ57 195 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 OR52K1Q8NGK4 314 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 CXorf40AQ8TE69 158 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 IFT81Q8WYA0 676 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 CPT1BQ92523 772 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 UBXN4Q92575 508 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 PDXPQ96GD0 296 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 DPYSL5Q9BPU6 564 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 UNKQ9C0B0 810 aaKnown RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 DPEP2Q9H4A9 486 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 PCDH12Q9NPG4 1184 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 FAM114A2Q9NRY5 505 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 SAMD15Q9P1V8 674 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP11-207ENST00000478596 RPL26L1Q9UNX3 145 aaKnown RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 NEU2Q9Y3R4 380 aa14.3□□□□□ -0.12
USP11-207ENST00000478596 V9GYY5 206 aaPredicted RBP14.3□□□□□ -0.12
USP11-207ENST00000478596 C1orf232A0A0U1RR37 186 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 TSPAN11A1L157 253 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 A8MX80 341 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 AP3B1O00203 1094 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 TRAFD1O14545 582 aaPredicted RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 TMEM63AO94886 807 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 ELFN1P0C7U0 828 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 TUBB4BP68371 445 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 MTM1Q13496 603 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 MAP7Q14244 749 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 LRRC14Q15048 493 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 UGP2Q16851 508 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 ZXDCQ2QGD7 858 aaPredicted RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 RNASEH2BQ5TBB1 312 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 CCDC25Q86WR0 208 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 ZSWIM9Q86XI8 627 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 PPHLN1Q8NEY8 458 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 ECHDC3Q96DC8 303 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 WDR92Q96MX6 357 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 WRAP53Q9BUR4 548 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 APOOQ9BUR5 198 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 GPR63Q9BZJ6 419 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 XAB2Q9HCS7 855 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 WHRNQ9P202 907 aa14.29□□□□□ -0.12
USP11-207ENST00000478596 MTRF1LQ9UGC7 380 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 MRPS18BQ9Y676 258 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 OAS3Q9Y6K5 1087 aaKnown RBP14.29□□□□□ -0.12
USP11-207ENST00000478596 A0A0J9YYE9 177 aa14.28□□□□□ -0.12
USP11-207ENST00000478596 TCRBV7S3A2A0A539 114 aa14.28□□□□□ -0.12
USP11-207ENST00000478596 RHPN2P1A8MT19 583 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms