RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SPOPO43791 374 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 MT-ND3P03897 115 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PDGFAP04085 211 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 EBLN1P0CF75 366 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 HLA-DPA1P20036 260 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 TUBB3Q13509 450 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 LAMB3Q13751 1172 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PPP2R5EQ16537 467 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 FAM199XQ6PEV8 388 aaPredicted RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PID1Q7Z2X4 250 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 BEND7Q8N7W2 519 aaPredicted RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 SIDT2Q8NBJ9 832 aaKnown RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 IPMKQ8NFU5 416 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 GORASP1Q9BQQ3 440 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 ZCCHC2Q9C0B9 1178 aaKnown RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 TWSG1Q9GZX9 223 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PDE7BQ9NP56 450 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 SMOXQ9NWM0 555 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 KLHL8Q9P2G9 620 aaPredicted RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 RARRES3Q9UL19 164 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 CFAP20Q9Y6A4 193 aaKnown RBP16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PIKFYVEQ9Y2I7 2098 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 ICE1Q9Y2F5 2266 aa16.33■□□□□ 0.2
TRIM13-208ENST00000478111 PIPSLA2A3N6 862 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 OR5K3A6NET4 321 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 C21orf140B9A014 251 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 MKRN2OSH3BPM6 223 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 MTSS1O43312 755 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 PSTPIP1O43586 416 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 NTRK1P04629 796 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 MTHFD1P11586 935 aaKnown RBP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 CD97P48960 835 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 MARCKSL1P49006 195 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 PMS2P54278 862 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 HADHBP55084 474 aaKnown RBP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 MPP3Q13368 585 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 ITGA9Q13797 1035 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 TFDP3Q5H9I0 405 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 BPHLQ86WA6 291 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 APLFQ8IW19 511 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 D2HGDHQ8N465 521 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 ZNF398Q8TD17 642 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 NAT14Q8WUY8 206 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 P3H4Q92791 437 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 HAUS1Q96CS2 278 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 ZNF514Q96K75 400 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRIM13-208ENST00000478111 VAT1Q99536 393 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 TRIM55Q9BYV6 548 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 ACTL8Q9H568 366 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 FGF21Q9NSA1 209 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 CENPEQ02224 2701 aa16.32■□□□□ 0.2
TRIM13-208ENST00000478111 TLCD2A6NGC4 264 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 SGTAO43765 313 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 RFPL1O75677 317 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 DNAJB5O75953 348 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 AGTP01019 485 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 ACY1Q03154 408 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 SEMA5AQ13591 1074 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 FNBP1LQ5T0N5 605 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 DUS1LQ6P1R4 473 aaKnown RBP16.31■□□□□ 0.2
TRIM13-208ENST00000478111 CYB5D1Q6P9G0 228 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 KLHL35Q6PF15 583 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 ASB18Q6ZVZ8 466 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 KMT5CQ86Y97 462 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 KATNAL2Q8IYT4 538 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 SPDYE1Q8NFV5 336 aaPredicted RBP16.31■□□□□ 0.2
TRIM13-208ENST00000478111 CD180Q99467 661 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 WWP1Q9H0M0 922 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 C10orf88Q9H8K7 445 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 IMP3Q9NV31 184 aaKnown RBP16.31■□□□□ 0.2
TRIM13-208ENST00000478111 HRASLS2Q9NWW9 162 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 PKP3Q9Y446 797 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 ARL5AQ9Y689 179 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 SHANK1Q9Y566 2161 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 UNC79Q9P2D8 2635 aa16.31■□□□□ 0.2
TRIM13-208ENST00000478111 MGAT4DA6NG13 374 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 HACD1B0YJ81 288 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 STX7O15400 261 aaKnown RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 PBLDP30039 288 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 MLLT10P55197 1068 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 RPS18P62269 152 aaKnown RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 HSD11B2P80365 405 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 TBX2Q13207 712 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 MSLNQ13421 630 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 XRCC4Q13426 336 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 OLIG2Q13516 323 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 DNTTIP2Q5QJE6 756 aaKnown RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 RANBP10Q6VN20 620 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 ZNF517Q6ZMY9 492 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-208ENST00000478111 DET1Q7L5Y6 550 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 TEX19Q8NA77 164 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 SLC38A9Q8NBW4 561 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 OR2L2Q8NH16 312 aa16.3■□□□□ 0.2
TRIM13-208ENST00000478111 ZFPM2Q8WW38 1151 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms