RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZNF274Q96GC6 653 aaPredicted RBP3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CLPTM1LQ96KA5 538 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 MRGPRX4Q96LA9 322 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CFAP57Q96MR6 1250 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 PANX2Q96RD6 677 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 GAL3ST4Q96RP7 486 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 WACQ9BTA9 647 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 NUF2Q9BZD4 464 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 IMPG2Q9BZV3 1241 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 KLHL4Q9C0H6 718 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 DRC3Q9H069 523 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM107BQ9H098 131 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 USP44Q9H0E7 712 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 HDHD2Q9H0R4 259 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 C11orf54Q9H0W9 315 aaPredicted RBP3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 OR51V1Q9H2C8 321 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TPK1Q9H3S4 243 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 ABHD16BQ9H3Z7 469 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CUEDC2Q9H467 287 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 RMND5AQ9H871 391 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 UNKLQ9H9P5 680 aaKnown RBP3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 NEK6Q9HC98 313 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 PFDN4Q9NQP4 134 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM30AQ9NZY2 134 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CNIH4Q9P003 139 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 ATXN10Q9UBB4 475 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 SPASTQ9UBP0 616 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TRIM10Q9UDY6 481 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 APOBEC3BQ9UH17 382 aaKnown RBP3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC23A1Q9UHI7 598 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 ATP6V1HQ9UI12 483 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TUBE1Q9UJT0 475 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CDH7Q9ULB5 785 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 OGDHLQ9ULD0 1010 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 SORCS3Q9UPU3 1222 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 PCDHB1Q9Y5F3 818 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TEX264Q9Y6I9 313 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 UBR1Q8IWV7 1749 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 TNRQ92752 1358 aa3.5□□□□□ -1.85
FNDC3B-209ENST00000478016 CPS1P31327 1500 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PFASO15067 1338 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PNPLA7Q6ZV29 1317 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 KDM3AQ9Y4C1 1321 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ERVK-7P63135 1459 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PIK3C2BO00750 1634 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DEPDC5O75140 1603 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PTPN23Q9H3S7 1636 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ALKQ9UM73 1620 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 STRCP1A6NGW2 1772 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 A0A0J9YYE9 177 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TRBC2A0A5B9 178 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TMEM120BA0PK00 339 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MACROD2A1Z1Q3 448 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM234BA2RU67 622 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 AQP12BA6NM10 295 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 OR6C76A6NM76 312 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SNTNA6NMZ2 147 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DRGXA6NNA5 263 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ERVV-1B6SEH8 477 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DIRC3C9JPN6 131 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 UBE2Q2LH0YL09 131 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 MYO1FO00160 1098 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 LEFTY2O00292 366 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ALOX15BO15296 676 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 EIF3DO15371 548 aaKnown RBP eCLIP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 LRRTM2O43300 516 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CTIFO43310 598 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 STX10O60499 249 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 FAM20BO75063 409 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SORBS2O94875 1100 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 HEXIM1O94992 359 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PIGNO95427 931 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 NSA2O95478 260 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 PEX11BO96011 259 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TRBC1P01850 177 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 APOA1P02647 267 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 AMHP03971 560 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 C1SP09871 688 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 TYRP14679 529 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 DARSP14868 501 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ETS1P14921 441 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 POLR2CP19387 275 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 EPHA8P29322 1005 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 HLA-FP30511 346 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CAPZA2P47755 286 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 LEPRP48357 1165 aaKnown RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SLC9A3P48764 834 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 AARSP49588 968 aaKnown RBP eCLIP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ACADVLP49748 655 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CHN2P52757 468 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 SMSP52788 366 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CRYBB1P53674 252 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ATP5IP56385 69 aaPredicted RBP3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 CLDN8P56748 225 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 STX17P56962 302 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 ACTR3P61158 418 aa3.49□□□□□ -1.85
FNDC3B-209ENST00000478016 HNRNPKP61978 463 aaKnown RBP eCLIP3.49□□□□□ -1.852e-8■■■■□ 22.9
FNDC3B-209ENST00000478016 YWHAEP62258 255 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms