RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 A0A096LPK6 155 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 FAM157AC9JC47 383 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 IPO8O15397 1037 aaKnown RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 KLK10O43240 276 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 FIBPO43427 364 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 SLC28A2O43868 658 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 GLUD1P00367 558 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 SERPINC1P01008 464 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 ACAA1P09110 424 aaPredicted RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 PBX3P40426 434 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 GPR12P47775 334 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 METAP2P50579 478 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS50-214ENST00000477935 HSD17B4P51659 736 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 CRYZQ08257 329 aaKnown RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 DDX10Q13206 875 aaKnown RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 HNRNPDQ14103 355 aaKnown RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 SLC18A3Q16572 532 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 TMEM266Q2M3C6 531 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 CRELD2Q6UXH1 353 aaPredicted RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 RBFAQ8N0V3 343 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 RASSF8Q8NHQ8 419 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 ADAMTS14Q8WXS8 1223 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 SEPT1Q8WYJ6 367 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 TMEM18Q96B42 140 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 SH3KBP1Q96B97 665 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 TTC14Q96N46 770 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 GFM1Q96RP9 751 aaKnown RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 EDEM2Q9BV94 578 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 TMEM9BQ9NQ34 198 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 TRPV5Q9NQA5 729 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 KLK13Q9UKR3 277 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 GREB1LQ9C091 1923 aaPredicted RBP4.73□□□□□ -1.65
VPS50-214ENST00000477935 APC2O95996 2303 aa4.73□□□□□ -1.65
VPS50-214ENST00000477935 DOPEY1Q5JWR5 2465 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 RALGAPA1Q6GYQ0 2036 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 A0A087WV48 116 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 A0A0U1RQF3 1178 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 SHISA7A6NL88 538 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ENO4A6NNW6 628 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 PEX12O00623 359 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ECI2O75521 394 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 RHOBTB1O94844 696 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 CAVIN2O95810 425 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 GALTP07902 379 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 PDHBP11177 359 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 TNFRSF8P28908 595 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 TCF7P36402 384 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 CRYBB1P53674 252 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 LTBQ06643 244 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 SLC12A1Q13621 1099 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ZNF585BQ52M93 769 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ATG9BQ674R7 924 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 NCAPH2Q6IBW4 605 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 FAM83HQ6ZRV2 1179 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 EXOC8Q8IYI6 725 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 GPR65Q8IYL9 337 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ZNF843Q8N446 348 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 DNAAF1Q8NEP3 725 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 FAM3CQ92520 227 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 HSPH1Q92598 858 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 FGF13Q92913 245 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ZNF707Q96C28 371 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 PHF21BQ96EK2 531 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 MSANTD3Q96H12 275 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 CDHR1Q96JP9 859 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 ZSCAN31Q96LW9 406 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 INPP4AQ96PE3 977 aaPredicted RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 TMEM47Q9BQJ4 181 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 CLSTN3Q9BQT9 956 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 REEP2Q9BRK0 252 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 KRTAP1-5Q9BYS1 174 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 NPFFR1Q9GZQ6 430 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 SELENONQ9NZV5 590 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 NDRG2Q9UN36 371 aaKnown RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 MYO5AQ9Y4I1 1855 aaKnown RBP4.72□□□□□ -1.65
VPS50-214ENST00000477935 CREBBPQ92793 2442 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 LCTP09848 1927 aa4.72□□□□□ -1.65
VPS50-214ENST00000477935 CLEC18AA5D8T8 446 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 PCNX2A6NKB5 2137 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 SH2D7A6NKC9 451 aaPredicted RBP4.71□□□□□ -1.66
VPS50-214ENST00000477935 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 RANBP6O60518 1105 aaKnown RBP4.71□□□□□ -1.66
VPS50-214ENST00000477935 TSPAN3O60637 253 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 RFPL2O75678 378 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 SOX30O94993 753 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 PRB1P04280 392 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 URODP06132 367 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 CHRM4P08173 479 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 HNRNPA1P09651 372 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS50-214ENST00000477935 CCDC192P0DO97 292 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 CKMT1AP12532 417 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 DCTDP32321 178 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 SLC26A2P50443 739 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 ARSFP54793 590 aa4.71□□□□□ -1.66
VPS50-214ENST00000477935 SLC18A2Q05940 514 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms