RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ATXN7O15265 892 aaPredicted RBP21.3■■□□□ 1
COL9A3-211ENST00000477612 NRDCO43847 1150 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 MAPK9P45984 424 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 PPM1FP49593 454 aaPredicted RBP21.3■■□□□ 1
COL9A3-211ENST00000477612 ARHGAP40Q5TG30 622 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 CCDC81Q6ZN84 652 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 DET1Q7L5Y6 550 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 OR52K1Q8NGK4 314 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 MAIP1Q8WWC4 291 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 ART4Q93070 314 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 PMEPA1Q969W9 287 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 DCUN1D1Q96GG9 259 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 TEFMQ96QE5 360 aaKnown RBP21.3■■□□□ 1
COL9A3-211ENST00000477612 RANBP9Q96S59 729 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 SPRY4Q9C004 299 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 ZMYND15Q9H091 742 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 FAM96AQ9H5X1 160 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 SLC39A1Q9NY26 324 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 PAK5Q9P286 719 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 RIMKLBQ9ULI2 386 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 PPP2R2CQ9Y2T4 447 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 B3GALT1Q9Y5Z6 326 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 CFAP99D6REC4 459 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 CCL22O00626 93 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 IFNB1P01574 187 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 AMD1P17707 334 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 ACRV1P26436 265 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 CAPZBP47756 277 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 CDKN1CP49918 316 aaPredicted RBP21.29■■□□□ 1
COL9A3-211ENST00000477612 GFERP55789 205 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 RHDQ02161 417 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 CACNG1Q06432 222 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 SNX1Q13596 522 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 SKIDA1Q1XH10 827 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 ZNF658BQ4V348 819 aaPredicted RBP21.29■■□□□ 1
COL9A3-211ENST00000477612 SNAP47Q5SQN1 464 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 CAPRIN2Q6IMN6 1127 aaKnown RBP21.29■■□□□ 1
COL9A3-211ENST00000477612 SERPINA9Q86WD7 417 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 GLIS1Q8NBF1 620 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 GPR150Q8NGU9 434 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 WBP1Q96G27 269 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 INSM2Q96T92 566 aaPredicted RBP21.29■■□□□ 1
COL9A3-211ENST00000477612 SEMA5BQ9P283 1151 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 PSMD13Q9UNM6 376 aa21.29■■□□□ 1
COL9A3-211ENST00000477612 STMND1H3BQB6 276 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 CAPN5O15484 640 aaPredicted RBP21.28■■□□□ 1
COL9A3-211ENST00000477612 MTHFD1P11586 935 aaKnown RBP21.28■■□□□ 1
COL9A3-211ENST00000477612 ETS1P14921 441 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 TYRP1P17643 537 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 LAMB3Q13751 1172 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 DCAF12Q5T6F0 453 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 FAM129CQ86XR2 697 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 TAB3Q8N5C8 712 aaPredicted RBP21.28■■□□□ 1
COL9A3-211ENST00000477612 HM13Q8TCT9 377 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 RSC1A1Q92681 617 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 ZPBPQ9BS86 351 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 CASS4Q9NQ75 786 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 RAB6BQ9NRW1 208 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 PIH1D1Q9NWS0 290 aaKnown RBP21.28■■□□□ 1
COL9A3-211ENST00000477612 SIDT1Q9NXL6 827 aaKnown RBP21.28■■□□□ 1
COL9A3-211ENST00000477612 PCDHB11Q9Y5F2 797 aa21.28■■□□□ 1
COL9A3-211ENST00000477612 ERVH48-1M5A8F1 160 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 FGGP02679 453 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 GSTM1P09488 218 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 PBLDP30039 288 aaPredicted RBP21.27■■□□□ 1
COL9A3-211ENST00000477612 GSTM4Q03013 218 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 ACVR1Q04771 509 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 SEPT6Q14141 434 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 ZRANB3Q5FWF4 1079 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 ANKS6Q68DC2 871 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 PCSK4Q6UW60 755 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 CEACAM20Q6UY09 585 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 C4orf22Q6V702 233 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 PRSS42Q7Z5A4 293 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 PRUNE1Q86TP1 453 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 CCDC89Q8N998 374 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 DNAAF3Q8N9W5 541 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 NAT14Q8WUY8 206 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 PEX13Q92968 403 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 CCM2Q9BSQ5 444 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 WWP1Q9H0M0 922 aa21.27■■□□□ 1
COL9A3-211ENST00000477612 ZNF768Q9H5H4 540 aaKnown RBP21.27■■□□□ 1
COL9A3-211ENST00000477612 HEATR9A2RTY3 570 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 GAS8O95995 478 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 PRSS56P0CW18 603 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 ADRA1DP25100 572 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 FOXN2P32314 431 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 RPL22P35268 128 aaKnown RBP21.26■□□□□ 0.99
COL9A3-211ENST00000477612 GRIA1P42261 906 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 ITIH4Q14624 930 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 PIANPQ8IYJ0 282 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 CFAP206Q8IYR0 622 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 OR13J1Q8NGT2 312 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 KLHL6Q8WZ60 621 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 TTC9Q92623 222 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 NKD1Q969G9 470 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 ZDHHC12Q96GR4 267 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 SGSM3Q96HU1 749 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 TGM7Q96PF1 710 aa21.26■□□□□ 0.99
COL9A3-211ENST00000477612 EIF2B3Q9NR50 452 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms