RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CYP2S1Q96SQ9 504 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 CARS2Q9HA77 564 aaKnown RBP13.27□□□□□ -0.29
DFFB-209ENST00000477548 TREX1Q9NSU2 369 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 AIG1Q9NVV5 245 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 ADPRHL2Q9NX46 363 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 USE1Q9NZ43 259 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 SHROOM3Q8TF72 1996 aa13.27□□□□□ -0.29
DFFB-209ENST00000477548 CENPXA8MT69 81 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 CRYZL1O95825 349 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 MT-ND2P03891 347 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 ARF4P18085 180 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 RYKP34925 604 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 OAZ1P54368 228 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 CDKN2DP55273 166 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 OR2B6P58173 313 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 INTS6LQ5JSJ4 861 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 ZNF544Q6NX49 715 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 SCIMPQ6UWF3 145 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 GDPD3Q7L5L3 318 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 ZNF540Q8NDQ6 660 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 SLC47A1Q96FL8 570 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 MED30Q96HR3 178 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 TMEM246Q9BRR3 403 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 ZBTB20Q9HC78 741 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 SNTG2Q9NY99 539 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 U3KQV3 271 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 NUP205Q92621 2012 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 PRKD3O94806 890 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 GOT2P00505 430 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 CYP11A1P05108 521 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 DBTP11182 482 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 ACVR2AP27037 513 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 CD6P30203 668 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 S100A5P33763 92 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 MASP1P48740 699 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 NFKB2Q00653 900 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 YWHAHQ04917 246 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 WDR45BQ5MNZ6 344 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 SNAP47Q5SQN1 464 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 HFE2Q6ZVN8 426 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 OR6F1Q8NGZ6 308 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 ZNF566Q969W8 418 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 REXO5Q96IC2 774 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 ACTR8Q9H981 624 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 WDR70Q9NW82 654 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 UTS2RQ9UKP6 389 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 COMMD10Q9Y6G5 202 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 PABPN1LA6NDY0 278 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 GGT1P19440 569 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 RPL34P49207 117 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 CLCNKBP51801 687 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 TUBA1BP68363 451 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 CDK10Q15131 360 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 PLEKHG6Q3KR16 790 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 TPRG1LQ5T0D9 272 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 PNCKQ6P2M8 343 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 METTL7BQ6UX53 244 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 ARHGAP36Q6ZRI8 547 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 TUBA1AQ71U36 451 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 GALNT5Q7Z7M9 940 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 GALNT12Q8IXK2 581 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 GIPC2Q8TF65 315 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 CHAC2Q8WUX2 184 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 PABPC5Q96DU9 382 aaKnown RBP13.26□□□□□ -0.29
DFFB-209ENST00000477548 ZFYVE19Q96K21 471 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 DMRTB1Q96MA1 342 aa13.26□□□□□ -0.29
DFFB-209ENST00000477548 LCTP09848 1927 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 ZW10O43264 779 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 PGK2P07205 417 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 CYP4B1P13584 511 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 ZFP36L2P47974 494 aaKnown RBP13.25□□□□□ -0.29
DFFB-209ENST00000477548 ATP6AP1LQ52LC2 224 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 FBXO48Q5FWF7 155 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 SETD9Q8NE22 299 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 PRKD2Q9BZL6 878 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
DFFB-209ENST00000477548 ADGRE2Q9UHX3 823 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 LTBP3Q9NS15 1303 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 BPTFQ12830 3046 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 A0A1B0GTL3 188 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 A8MV72 311 aaPredicted RBP13.25□□□□□ -0.29
DFFB-209ENST00000477548 HAT1O14929 419 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 RGS10O43665 173 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 PGLSO95336 258 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 GEMP55040 296 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 SLC35A2P78381 396 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 SEMA3BQ13214 749 aa13.25□□□□□ -0.29
DFFB-209ENST00000477548 IL18R1Q13478 541 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms