RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 DDX28Q9NUL7 540 aaKnown RBP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 ACOXLQ9NUZ1 547 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 DMAC2Q9NW81 257 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 PPP1R14DQ9NXH3 145 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 SMPD3Q9NY59 655 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 EIF3KQ9UBQ5 218 aaKnown RBP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 IP6K2Q9UHH9 426 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 MAD2L2Q9UI95 211 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 KLHL21Q9UJP4 597 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 FBXO5Q9UKT4 447 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 AUP1Q9Y679 476 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 CYP2D7A0A087X1C5 515 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RNF103-CHMP3A0A140T963 221 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 A0A1B0GVM2 712 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 A0A1W2PRG6 482 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TYW5A2RUC4 315 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 C2orf81A6NN90 581 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 BBIP1A8MTZ0 92 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TRIM49D1C9J1S8 452 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 H0Y858 1186 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TRIM77I1YAP6 450 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TOR1AO14656 332 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 APOL1O14791 398 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TFECO14948 347 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ZBTB5O15062 677 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 NKRFO15226 690 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PDE9AO76083 593 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR5F1O95221 314 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SNAPINO95295 136 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CELF2O95319 508 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 LYPLA2O95372 231 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SEC24AO95486 1093 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 IFNA14P01570 189 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HLA-DRAP01903 254 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KRT19P08727 400 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TGFB3P10600 412 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SLC2A3P11169 496 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RALAP11233 206 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ACADMP11310 421 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 IL7P13232 177 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TGM2P21980 687 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 EPHA3P29320 983 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RPL9P32969 192 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KRT20P35900 424 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ETV6P41212 452 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PTPN9P43378 593 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MARCKSL1P49006 195 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HCAR3P49019 387 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SEPHS1P49903 392 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SERPINH1P50454 418 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 NAPAP54920 295 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR2B6P58173 313 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 MYL6P60660 151 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RALGDSQ12967 914 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CAMK1Q14012 370 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 GK3PQ14409 553 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 LRRC41Q15345 812 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 STK11Q15831 433 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ATP6AP1Q15904 470 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 NRF1Q16656 503 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PTPROQ16827 1216 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FBXO43Q4G163 708 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FASTKD1Q53R41 847 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PRR16Q569H4 304 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RUNDC3AQ59EK9 446 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KCNT1Q5JUK3 1230 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PRAMEF18Q5VWM3 479 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SULT1C3Q6IMI6 304 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FAM45BPQ6NSW5 357 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 AADACL2Q6P093 401 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TATDN1Q6P1N9 297 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 DCUN1D2Q6PH85 259 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM179Q6ZVK1 233 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 SNX32Q86XE0 403 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CATSPER3Q86XQ3 398 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 RAB43Q86YS6 212 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 BRSK2Q8IWQ3 736 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 THNSL1Q8IYQ7 743 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TCTE3Q8IZS6 198 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 LINC00518Q8N0U6 118 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CLIP4Q8N3C7 705 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 AMER2Q8N7J2 671 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 KIAA1958Q8N8K9 716 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 ATAD1Q8NBU5 361 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 PAPD5Q8NDF8 572 aaKnown RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 HIPK4Q8NE63 616 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FBXO36Q8NEA4 188 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 IL17RDQ8NFM7 739 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 CMASQ8NFW8 434 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-212ENST00000477520 TTLQ8NG68 377 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR13J1Q8NGT2 312 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR5H6Q8NGV6 325 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR2T34Q8NGX1 318 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR2T3Q8NH03 318 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 OR8K5Q8NH50 307 aa4.66□□□□□ -1.66
PTCD3-212ENST00000477520 FAM45AQ8TCE6 357 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms