RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ZBTB11O95625 1053 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 LDLRP01130 860 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ALPPP05187 535 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC35G4P0C7Q5 338 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 POLR2CP19387 275 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 HLA-DPA1P20036 260 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 LPOP22079 712 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 GLRBP48167 497 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ITGA1P56199 1179 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 DYNLT1P63172 113 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ZBTB17Q13105 803 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 NFE2L1Q14494 772 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 RPE65Q16518 533 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 PTCHD3Q3KNS1 767 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ATP13A5Q4VNC0 1218 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ZRANB3Q5FWF4 1079 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 FNBP1LQ5T0N5 605 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 CCDC183Q5T5S1 534 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 MLIPQ5VWP3 458 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 E4F1Q66K89 784 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 LCN10Q6JVE6 187 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 TMEM220Q6QAJ8 160 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM151BQ6UXP7 276 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 MED25Q71SY5 747 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 B4GALNT4Q76KP1 1039 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 BPHLQ86WA6 291 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 KMT5CQ86Y97 462 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 CPNE8Q86YQ8 564 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 RAB43Q86YS6 212 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 RBMXL3Q8N7X1 1067 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 TTC13Q8NBP0 860 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 N4BP2L2Q92802 583 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF501Q96CX3 271 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 EID2BQ96D98 161 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 HDAC11Q96DB2 347 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 SNRNP40Q96DI7 357 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 C12orf66Q96MD2 445 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 FCRL4Q96PJ5 515 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 TSGA13Q96PP4 275 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 CD180Q99467 661 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF670Q9BS34 389 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 MAK16Q9BXY0 300 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 RAB33BQ9H082 229 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 WWP1Q9H0M0 922 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 DEF6Q9H4E7 631 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ACTR5Q9H9F9 607 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 MAGEE1Q9HCI5 957 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 IRAK4Q9NWZ3 460 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 TCFL5Q9UL49 500 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 PADI2Q9Y2J8 665 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 PCDHGB7Q9Y5F8 929 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 SNRNP200O75643 2136 aaKnown RBP6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 ZGRF1Q86YA3 2104 aa6.52□□□□□ -1.37
RTFDC1-206ENST00000477485 LRBAP50851 2863 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 CELSR2Q9HCU4 2923 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PCM1Q15154 2024 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 LRRD1A4D1F6 860 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC9B1P1A6NJY1 282 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PEX12O00623 359 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 AURKAO14965 403 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 BUD23O43709 281 aaKnown RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 MT-CYBP00156 380 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 POLBP06746 335 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 MTHFD1P11586 935 aaKnown RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 TNNT1P13805 278 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 MSH3P20585 1137 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 AGXTP21549 392 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 HNRNPH3P31942 346 aaKnown RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SPAM1P38567 509 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 FOLR3P41439 243 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PRKCIP41743 596 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PREPP48147 710 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 KPNA2P52292 529 aaKnown RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 CTSCP53634 463 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 TAS2R40P59535 323 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC10A2Q12908 348 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 ABRQ12979 859 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PDK2Q15119 407 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 NOMO1Q15155 1222 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PLEKHN1Q494U1 663 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 VWA5B1Q5TIE3 1220 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 IZUMO3Q5VZ72 239 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 PAPD7Q5XG87 772 aaKnown RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 WASH2PQ6VEQ5 465 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM83HQ6ZRV2 1179 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 TMC3Q7Z5M5 1100 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 C11orf96Q7Z7L8 435 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 HOOK3Q86VS8 718 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 HPS6Q86YV9 775 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SYTL1Q8IYJ3 562 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 DSELQ8IZU8 1212 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 D2HGDHQ8N465 521 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC25A41Q8N5S1 370 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 BEND7Q8N7W2 519 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 NIPA2Q8N8Q9 360 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 RASGEF1AQ8N9B8 481 aa6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 TMEM102Q8N9M5 508 aaPredicted RBP6.51□□□□□ -1.37
RTFDC1-206ENST00000477485 SLC38A9Q8NBW4 561 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms