RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SMARCD3Q6STE5 483 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 TWIST2Q8WVJ9 160 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 EFHD2Q96C19 240 aaPredicted RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 TSPAN1O60635 241 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 AVPR1BP47901 424 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 OLR1P78380 273 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 NOMO1Q15155 1222 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 PRR23BQ6ZRT6 265 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 HIST1H2AAQ96QV6 131 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 C11orf16Q9NQ32 467 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 AK5Q9Y6K8 562 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 AHCYP23526 432 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 PRSS55Q6UWB4 352 aaPredicted RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 SATL1Q86VE3 508 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 NXNL1Q96CM4 212 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 CFIP05156 583 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 TMEM220Q6QAJ8 160 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 CHERPQ8IWX8 916 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 DQX1Q8TE96 717 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 CILPO75339 1184 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 TSPAN9O75954 239 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 IPO13O94829 963 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 HDDC3Q8N4P3 179 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 WDR12Q9GZL7 423 aaKnown RBP18.37■□□□□ 0.53
VARS2-209ENST00000477288 CHRAC1Q9NRG0 131 aa18.37■□□□□ 0.53
VARS2-209ENST00000477288 FADS2P1A8MWK0 482 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 CCL22O00626 93 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 OR7A10O76100 309 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 COL6A1P12109 1028 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SEPHS1P49903 392 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SLC8B1Q6J4K2 584 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 MSANTD1Q6ZTZ1 278 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 GBA3Q9H227 469 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 DPEP3Q9H4B8 488 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 FSCN2O14926 492 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 CYB5AP00167 134 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TSPAN5P62079 268 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 LDLRAP1Q5SW96 308 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 IRGQQ8WZA9 623 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 ZDHHC4Q9NPG8 344 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 NUDT4Q9NZJ9 180 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 VARSP26640 1264 aaKnown RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 TNFRSF8P28908 595 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 CCR10P46092 362 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 PHF12Q96QT6 1004 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 HBS1LQ9Y450 684 aaKnown RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 FADS3Q9Y5Q0 445 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 PMF1-BGLAPU3KQ54 211 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 A0A1B0GVM2 712 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TCAF2A6NFQ2 919 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 PEX10O60683 326 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 APOC1P02654 83 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 MXD1Q05195 221 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SP140Q13342 867 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 GTF2H2Q13888 395 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SLC5A9Q2M3M2 681 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 PUS10Q3MIT2 529 aaKnown RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 VPS26BQ4G0F5 336 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 UBAP2Q5T6F2 1119 aaKnown RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 CLEC6AQ6EIG7 209 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 GTF2H2CQ6P1K8 395 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 LNX2Q8N448 690 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TNFAIP8L1Q8WVP5 186 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TBATAQ96M53 351 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 ARHGEF4Q9NR80 690 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 GNB5O14775 395 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SYN3O14994 580 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 ALOX15BO15296 676 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TGFB1I1O43294 461 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 RGS10O43665 173 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 LGR5O75473 907 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SERPINA3P01011 423 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 INHAP05111 366 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 MPP1Q00013 466 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 PLET1Q6UQ28 207 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 SERPINA9Q86WD7 417 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 RASGEF1AQ8N9B8 481 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 CITED4Q96RK1 184 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 TRMOQ9BU70 441 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 RGS17Q9UGC6 210 aaPredicted RBP18.36■□□□□ 0.53
VARS2-209ENST00000477288 SNX10Q9Y5X0 201 aa18.36■□□□□ 0.53
VARS2-209ENST00000477288 FAM237AA0A1B0GTK4 181 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 INSIG1O15503 277 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 GATBO75879 557 aaKnown RBP18.35■□□□□ 0.53
VARS2-209ENST00000477288 BPGMP07738 259 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 ALOX5P09917 674 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 GNSP15586 552 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 CARTPTQ16568 116 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 AMIGO1Q86WK6 493 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 POP5Q969H6 163 aaKnown RBP18.35■□□□□ 0.53
VARS2-209ENST00000477288 GTPBP3Q969Y2 492 aaKnown RBP18.35■□□□□ 0.53
VARS2-209ENST00000477288 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 RNF121Q9H920 327 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 RIPK3Q9Y572 518 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 TEX46H3BTG2 121 aa18.35■□□□□ 0.53
VARS2-209ENST00000477288 MT-ND1P03886 318 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms