RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 WT1P19544 449 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 PBLDP30039 288 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 CXCR5P32302 372 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 HALP42357 657 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 CTSCP53634 463 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 MC2RQ01718 297 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 CDH17Q12864 832 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 SIX1Q15475 284 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 DRICH1Q6PGQ1 229 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 TMEM220Q6QAJ8 160 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 DET1Q7L5Y6 550 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 SNX20Q7Z614 316 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 AMZ2Q86W34 360 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 PLXDC1Q8IUK5 500 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 EXTL1Q92935 676 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 ARHGAP9Q9BRR9 750 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 ETNK1Q9HBU6 452 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 FBXO8Q9NRD0 319 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 RAB6BQ9NRW1 208 aa15.89■□□□□ 0.13
COL1A1-205ENST00000476387 PIH1D1Q9NWS0 290 aaKnown RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 MN1Q10571 1320 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-205ENST00000476387 ASH1LQ9NR48 2969 aaKnown RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 CCL22O00626 93 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 POP7O75817 140 aaKnown RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 VIPP01282 170 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 ANKRD34CP0C6C1 535 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 RPL10P27635 214 aaKnown RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 MC4RP32245 332 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 MAPK9P45984 424 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 XIAPP98170 497 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 SEMA5AQ13591 1074 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 GPR33Q49SQ1 333 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 ZRANB3Q5FWF4 1079 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 SNAP47Q5SQN1 464 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 FNBP1LQ5T0N5 605 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 AGAP9Q5VTM2 703 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 ANKS6Q68DC2 871 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 C4orf22Q6V702 233 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 WASH2PQ6VEQ5 465 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 C11orf96Q7Z7L8 435 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 CACNA2D3Q8IZS8 1091 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 NXPE1Q8N323 547 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 IL22RA1Q8N6P7 574 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 OR52K1Q8NGK4 314 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 STYXQ8WUJ0 223 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 JPH3Q8WXH2 748 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 CXorf40BQ96DE9 158 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 WASH6PQ9NQA3 447 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 HOMER3Q9NSC5 361 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 NLE1Q9NVX2 485 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 PILRAQ9UKJ1 303 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 JRKLQ9Y4A0 524 aa15.88■□□□□ 0.13
COL1A1-205ENST00000476387 DNMT3AQ9Y6K1 912 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-205ENST00000476387 TENM4Q6N022 2769 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 A8MU76 341 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 CAPN5O15484 640 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-205ENST00000476387 APRTP07741 180 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 ETS1P14921 441 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 CA5AP35218 305 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 DRG2P55039 364 aaKnown RBP15.87■□□□□ 0.13
COL1A1-205ENST00000476387 DMPKQ09013 629 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 LAMB3Q13751 1172 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 TBR1Q16650 682 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 ABRAXAS1Q6UWZ7 409 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 TMEM26Q6ZUK4 368 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 PRUNE1Q86TP1 453 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 RBM12BQ8IXT5 1001 aaKnown RBP15.87■□□□□ 0.13
COL1A1-205ENST00000476387 HEXDCQ8WVB3 486 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 COPS8Q99627 209 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 TBC1D10AQ9BXI6 508 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 SLC12A9Q9BXP2 914 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 SPRY4Q9C004 299 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 FAM96AQ9H5X1 160 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 POT1Q9NUX5 634 aa15.87■□□□□ 0.13
COL1A1-205ENST00000476387 SCHIP1Q9P0W5 487 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-205ENST00000476387 DRG1Q9Y295 367 aaKnown RBP15.87■□□□□ 0.13
COL1A1-205ENST00000476387 SETXQ7Z333 2677 aaKnown RBP15.86■□□□□ 0.13
COL1A1-205ENST00000476387 CCDC78A2IDD5 438 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 HEATR9A2RTY3 570 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 KLHL33A6NCF5 533 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 AGAP14A8MT82 685 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 H7C0S8 307 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 TOX3O15405 576 aaPredicted RBP15.86■□□□□ 0.13
COL1A1-205ENST00000476387 RAD1O60671 282 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 SUN1O94901 812 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 C9P02748 559 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 LIFP15018 202 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 RPL22P35268 128 aaKnown RBP15.86■□□□□ 0.13
COL1A1-205ENST00000476387 SLC19A1P41440 591 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 BASP1P80723 227 aaKnown RBP15.86■□□□□ 0.13
COL1A1-205ENST00000476387 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 TAS2R42Q7RTR8 314 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 NLGN4XQ8N0W4 816 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 GLIS1Q8NBF1 620 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 NLGN4YQ8NFZ3 816 aaPredicted RBP15.86■□□□□ 0.13
COL1A1-205ENST00000476387 PBKQ96KB5 322 aa15.86■□□□□ 0.13
COL1A1-205ENST00000476387 TRIT1Q9H3H1 467 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms