RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 HALP42357 657 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 PRLHRP49683 370 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 GFERP55789 205 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 CACNG1Q06432 222 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 DBN1Q16643 649 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 TAS2R42Q7RTR8 314 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 OR13J1Q8NGT2 312 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 WWP1Q9H0M0 922 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 SLC2A6Q9UGQ3 507 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 KLHL3Q9UH77 587 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 JRKLQ9Y4A0 524 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 MN1Q10571 1320 aaPredicted RBP20.73■□□□□ 0.91
LIME1-204ENST00000476183 SDK2Q58EX2 2172 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 CCDC162PA2VCL2 907 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 CFAP99D6REC4 459 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 UBXN7O94888 489 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 RALBP11234 206 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 CSTF2P33240 577 aaKnown RBP eCLIP20.72■□□□□ 0.91
LIME1-204ENST00000476183 TGIF1Q15583 401 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 SKIDA1Q1XH10 827 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 RASGEF1CQ8N431 466 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 BMPERQ8N8U9 685 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 SPDYE1Q8NFV5 336 aaPredicted RBP20.72■□□□□ 0.91
LIME1-204ENST00000476183 HEXDCQ8WVB3 486 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 JPH3Q8WXH2 748 aaPredicted RBP20.72■□□□□ 0.91
LIME1-204ENST00000476183 RSC1A1Q92681 617 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 MS4A14Q96JA4 679 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 ZNF778Q96MU6 729 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 RANBP9Q96S59 729 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 INSM2Q96T92 566 aaPredicted RBP20.72■□□□□ 0.91
LIME1-204ENST00000476183 CPNE5Q9HCH3 593 aa20.72■□□□□ 0.91
LIME1-204ENST00000476183 CFAP20Q9Y6A4 193 aaKnown RBP20.72■□□□□ 0.91
LIME1-204ENST00000476183 HEATR9A2RTY3 570 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 EFCAB7A8K855 629 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 C9P02748 559 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 MSNP26038 577 aaKnown RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 FOXN2P32314 431 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 CXADRP78310 365 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 ZNF658BQ4V348 819 aaPredicted RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 TSTD2Q5T7W7 516 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 DUS1LQ6P1R4 473 aaKnown RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 GSTA5Q7RTV2 222 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 ZFAND4Q86XD8 727 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 RBM12BQ8IXT5 1001 aaKnown RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 CFAP206Q8IYR0 622 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 CLDN19Q8N6F1 224 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 ART4Q93070 314 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 FCRL3Q96P31 734 aaPredicted RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 TAAR9Q96RI9 348 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 EIF2B3Q9NR50 452 aaKnown RBP20.71■□□□□ 0.91
LIME1-204ENST00000476183 ACSL5Q9ULC5 683 aa20.71■□□□□ 0.91
LIME1-204ENST00000476183 GAS8O95995 478 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 POLBP06746 335 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 MTHFD1P11586 935 aaKnown RBP20.7■□□□□ 0.9
LIME1-204ENST00000476183 AMD1P17707 334 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 ADRA1DP25100 572 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 CAPZBP47756 277 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 BROXQ5VW32 411 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 FAM129CQ86XR2 697 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 PLXDC1Q8IUK5 500 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 SLC35F6Q8N357 371 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 HM13Q8TCT9 377 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 HDAC10Q969S8 669 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 RMDN2Q96LZ7 410 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 B3GNT4Q9C0J1 378 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 HOMER3Q9NSC5 361 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 IMP3Q9NV31 184 aaKnown RBP20.7■□□□□ 0.9
LIME1-204ENST00000476183 SMARCAL1Q9NZC9 954 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 RIMKLBQ9ULI2 386 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 TCAF1Q9Y4C2 921 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 PCDHGA3Q9Y5H0 932 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 B3GALT1Q9Y5Z6 326 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 PRSS21Q9Y6M0 314 aa20.7■□□□□ 0.9
LIME1-204ENST00000476183 KLHL33A6NCF5 533 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 B4E171 279 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 CAPN5O15484 640 aaPredicted RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 TSPAN7P41732 249 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 LEPRP48357 1165 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 TMPRSS3P57727 454 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 BASP1P80723 227 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 ACVR1Q04771 509 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 SRSF6Q13247 344 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 CAPRIN2Q6IMN6 1127 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 TTC27Q6P3X3 843 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 C4orf22Q6V702 233 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 PBKQ96KB5 322 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 C9orf72Q96LT7 481 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 C12orf66Q96MD2 445 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 TGM7Q96PF1 710 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 TRMT1Q9NXH9 659 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 SLC39A1Q9NY26 324 aa20.69■□□□□ 0.9
LIME1-204ENST00000476183 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.69■□□□□ 0.9
LIME1-204ENST00000476183 C17orf113A0A1B0GUU1 675 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 TCRBV7S3A2A0A539 114 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 GOT2P00505 430 aaKnown RBP20.68■□□□□ 0.9
LIME1-204ENST00000476183 LIPCP11150 499 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 UCNP55089 124 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 SESN2P58004 480 aaPredicted RBP20.68■□□□□ 0.9
LIME1-204ENST00000476183 PPP1CAP62136 330 aa20.68■□□□□ 0.9
LIME1-204ENST00000476183 TRIP13Q15645 432 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms