RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 SERINC2Q96SA4 455 aa3.97□□□□□ -1.77
SDHB-204ENST00000475049 TUBA1CQ9BQE3 449 aa3.97□□□□□ -1.77
SDHB-204ENST00000475049 PPIL3Q9H2H8 161 aaKnown RBP3.97□□□□□ -1.77
SDHB-204ENST00000475049 BCCIPQ9P287 314 aaKnown RBP eCLIP3.97□□□□□ -1.77
SDHB-204ENST00000475049 NFKBIL1Q9UBC1 381 aaPredicted RBP3.97□□□□□ -1.77
SDHB-204ENST00000475049 YIPF1Q9Y548 306 aa3.97□□□□□ -1.77
SDHB-204ENST00000475049 ZCWPW2A0A1B0GU75 182 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 OR2M5A3KFT3 312 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 SSX4O60224 188 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 LDB3O75112 727 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 CSPG5O95196 566 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 PPP1R3DO95685 299 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 GABRA5P31644 462 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 CCKARP32238 428 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 PSMC4P43686 418 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 MLLT10P55197 1068 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 CDH13P55290 713 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 EEF1A2Q05639 463 aaKnown RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 GAGE2EQ4V326 116 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 ASPRV1Q53RT3 343 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 ERMARDQ5T6L9 678 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 C6orf163Q5TEZ5 329 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 CAPRIN2Q6IMN6 1127 aaKnown RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 KIAA1161Q6NSJ0 714 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 GAGE2AQ6NT46 116 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 SPSB3Q6PJ21 355 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.96□□□□□ -1.78
SDHB-204ENST00000475049 CEP57Q86XR8 500 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 MUC20Q8N307 709 aaPredicted RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 ZBTB8BQ8NAP8 495 aaPredicted RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 RBM15BQ8NDT2 890 aaKnown RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 TTC14Q96N46 770 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 POLR3CQ9BUI4 534 aaPredicted RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 TRPC7Q9HCX4 862 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 MIOSQ9NXC5 875 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 CFDP1Q9UEE9 299 aaPredicted RBP3.96□□□□□ -1.78
SDHB-204ENST00000475049 GAGE2DQ9UEU5 116 aa3.96□□□□□ -1.78
SDHB-204ENST00000475049 DIAPH2O60879 1101 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 PSMD10O75832 226 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 SNRNP70P08621 437 aaKnown RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 FMO5P49326 533 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 FUT6P51993 359 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 SNTB1Q13884 538 aaKnown RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 IL11RAQ14626 422 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 GCNT6Q5T4J0 391 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 STXBP5Q5T5C0 1151 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 TEX38Q6PEX7 206 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 KCTD8Q6ZWB6 473 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 Q75L30 129 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 RBM23Q86U06 439 aaKnown RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 EXOC3L1Q86VI1 746 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 TMEM173Q86WV6 379 aaPredicted RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 MAB21L3Q8N8X9 362 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 POC1AQ8NBT0 407 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 TSPAN14Q8NG11 270 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 SPATA20Q8TB22 786 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 TEKT4Q8WW24 435 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 SORCS1Q8WY21 1168 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 MTERF3Q96E29 417 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 FAM84BQ96KN1 310 aaPredicted RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 NEK1Q96PY6 1258 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 OR6C1Q96RD1 312 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 FNDC11Q9BVV2 318 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 MOV10L1Q9BXT6 1211 aaKnown RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 RABEP2Q9H5N1 569 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 DDX31Q9H8H2 851 aaKnown RBP3.95□□□□□ -1.78
SDHB-204ENST00000475049 EVA1AQ9H8M9 152 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 FKRPQ9H9S5 495 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 EBF2Q9HAK2 575 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 HHATLQ9HCP6 504 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 DLGAP4Q9Y2H0 992 aa3.95□□□□□ -1.78
SDHB-204ENST00000475049 SMARCA2P51531 1590 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 TRBC2A0A5B9 178 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 ASPDHA6ND91 283 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 SMTNL1A8MU46 457 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 PRAC2D3DTV9 90 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 UBE2CO00762 179 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 DVL1O14640 695 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 GPR137BO60478 399 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 TSPAN1O60635 241 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 CREG1O75629 220 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 GGPS1O95749 300 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 TRUB2O95900 331 aaKnown RBP3.94□□□□□ -1.78
SDHB-204ENST00000475049 APOA4P06727 396 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 LIPFP07098 398 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 MYBL1P10243 752 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 AHRP35869 848 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 ARCN1P48444 511 aaKnown RBP3.94□□□□□ -1.78
SDHB-204ENST00000475049 ZNF132P52740 706 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 DVL1P1P54792 670 aaPredicted RBP3.94□□□□□ -1.78
SDHB-204ENST00000475049 RUNX1T1Q06455 604 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 ALCAMQ13740 583 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 CBWD6Q4V339 395 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 CBWD3Q5JTY5 395 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 PDSS1Q5T2R2 415 aa3.94□□□□□ -1.78
SDHB-204ENST00000475049 NDUFAF5Q5TEU4 345 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms