RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 FBXO25Q8TCJ0 367 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 PATE1Q8WXA2 126 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 BIRC8Q96P09 236 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 PRDM8Q9NQV8 689 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 INTS10Q9NVR2 710 aaKnown RBP16.62■□□□□ 0.25
SCAF11-206ENST00000474828 MOCS1Q9NZB8 636 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 SCHIP1Q9P0W5 487 aaPredicted RBP16.62■□□□□ 0.25
SCAF11-206ENST00000474828 DMGDHQ9UI17 866 aaKnown RBP16.62■□□□□ 0.25
SCAF11-206ENST00000474828 RNF215Q9Y6U7 377 aa16.62■□□□□ 0.25
SCAF11-206ENST00000474828 COL27A1Q8IZC6 1860 aaPredicted RBP16.62■□□□□ 0.25
SCAF11-206ENST00000474828 PPM1DO15297 605 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 OPA1O60313 960 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 GUCY2DQ02846 1103 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 NFE2L1Q14494 772 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 CLPPQ16740 277 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-206ENST00000474828 ZNF449Q6P9G9 518 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 UNC5AQ6ZN44 842 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 TMPRSS7Q7RTY8 843 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 SDCCAG8Q86SQ7 713 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-206ENST00000474828 VPS37BQ9H9H4 285 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 LATS2Q9NRM7 1088 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 SIRPGQ9P1W8 387 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 ZNF624Q9P2J8 865 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-206ENST00000474828 RABGEF1Q9UJ41 708 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 VPS9D1Q9Y2B5 631 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 WDR37Q9Y2I8 494 aa16.61■□□□□ 0.25
SCAF11-206ENST00000474828 SLC5A10A0PJK1 596 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 ESPNB1AK53 854 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 F8W8V4 182 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 LIN7AO14910 233 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 FTH1P02794 183 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 ESR1P03372 595 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 OR56A5P0C7T3 313 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 SLC19A1P41440 591 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 CD151P48509 253 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 MAZP56270 477 aaKnown RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 INSM1Q01101 510 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 CLCA4Q14CN2 919 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 FASTKD3Q14CZ7 662 aaKnown RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 KIAA0408Q6ZU52 694 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 LDB1Q86U70 411 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 RELL1Q8IUW5 271 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 RBM12BQ8IXT5 1001 aaKnown RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 MAPK15Q8TD08 544 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 CALML6Q8TD86 181 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 NAT14Q8WUY8 206 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 ZFPM2Q8WW38 1151 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 CCDC74AQ96AQ1 378 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 OR52A5Q9H2C5 316 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 COG4Q9H9E3 785 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 LRIT1Q9P2V4 623 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 CPNE7Q9UBL6 633 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
SCAF11-206ENST00000474828 PCDHB1Q9Y5F3 818 aa16.6■□□□□ 0.25
SCAF11-206ENST00000474828 GOLGA8KD6RF30 607 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 GOLGA8TH3BQL2 631 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 GPC4O75487 556 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 TCEA3O75764 348 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 C1QAP02745 245 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 ECHS1P30084 290 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 LEPRP48357 1165 aaKnown RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 PLTPP55058 493 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 PLOD1Q02809 727 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 PDIA2Q13087 525 aaKnown RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 GBX1Q14549 363 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 CTSL3PQ5NE16 218 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 SPRED1Q7Z699 444 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 KCNMB4Q86W47 210 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 TMPRSS12Q86WS5 348 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 UNC5BQ8IZJ1 945 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 DCBLD1Q8N8Z6 715 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 C2CD4AQ8NCU7 369 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 FBXO36Q8NEA4 188 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 CERS2Q96G23 380 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 CCDC3Q9BQI4 270 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 FAM114A2Q9NRY5 505 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 C20orf96Q9NUD7 363 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 POT1Q9NUX5 634 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 KLHL42Q9P2K6 505 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 FBXO5Q9UKT4 447 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 CHMP2BQ9UQN3 213 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 CDYLQ9Y232 598 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
SCAF11-206ENST00000474828 GOLGA4Q13439 2230 aaKnown RBP16.59■□□□□ 0.25
SCAF11-206ENST00000474828 ASXL3Q9C0F0 2248 aa16.58■□□□□ 0.25
SCAF11-206ENST00000474828 TPRP12270 2363 aaKnown RBP16.58■□□□□ 0.25
SCAF11-206ENST00000474828 A0A1W2PQM1 296 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 CPED1A4D0V7 1026 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 H3BMM5 538 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 PFDN6O15212 129 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 B4GAT1O43505 415 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 NDUFS3O75489 264 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 GSTA2P09210 222 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 AOAHP28039 575 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 SLC1A2P43004 574 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms