RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 HM13Q8TCT9 377 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 CD200R1Q8TD46 325 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 ACMSDQ8TDX5 336 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 OR1E3Q8WZA6 343 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 TSACCQ96A04 125 aaPredicted RBP8.2□□□□□ -1.1
CNN3-205ENST00000474409 ISL2Q96A47 359 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 TMEM159Q96B96 161 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 APOPT1Q96IL0 206 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 ATP6V1G3Q96LB4 118 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 SH3GL2Q99962 352 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 TIMM29Q9BSF4 260 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 CCM2Q9BSQ5 444 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 LRFN3Q9BTN0 628 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 IQCGQ9H095 443 aaKnown RBP8.2□□□□□ -1.1
CNN3-205ENST00000474409 OSGEPL1Q9H4B0 414 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 COG4Q9H9E3 785 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 MED4Q9NPJ6 270 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 DNAJC28Q9NX36 388 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 APOBEC3BQ9UH17 382 aaKnown RBP8.2□□□□□ -1.1
CNN3-205ENST00000474409 ANKRD6Q9Y2G4 727 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 DNAJC16Q9Y2G8 782 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 R4GN57 208 aa8.2□□□□□ -1.1
CNN3-205ENST00000474409 UNC13CQ8NB66 2214 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 ADAMTS20P59510 1910 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 KLHL33A6NCF5 533 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 FOXO6A8MYZ6 492 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 HMGB1P1B2RPK0 211 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 TLR4O00206 839 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 COPEO14579 308 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LIN7AO14910 233 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 SGTAO43765 313 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 GLRA3O75311 464 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 RFPL1O75677 317 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 POP7O75817 140 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 TNFP01375 233 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CFIP05156 583 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PYGBP11216 843 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CTSEP14091 401 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 JUNDP17535 347 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 KRT4P19013 534 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CD9P21926 228 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 AOAHP28039 575 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CCR7P32248 378 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 HOXD12P35452 270 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CCNFP41002 786 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SKIV2L2P42285 1042 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 MAGEA12P43365 314 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CSNK1EP49674 416 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 BLKP51451 505 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 KPNA2P52292 529 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 HK3P52790 923 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PGGT1BP53609 377 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 NXPH1P58417 271 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 IRF9Q00978 393 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 HSPA14Q0VDF9 509 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LRP8Q14114 963 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 FZD2Q14332 565 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 CSHL1Q14406 222 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 NFE2L1Q14494 772 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 TCEA2Q15560 299 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SEPT7Q16181 437 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PYCR3Q53H96 274 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LRRC8EQ6NSJ5 796 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 KLC3Q6P597 504 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PAQR3Q6TCH7 311 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 NAPRTQ6XQN6 538 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 NKAPQ8N5F7 415 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SKA2Q8WVK7 121 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 ASZ1Q8WWH4 475 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 INPP5DQ92835 1189 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 GLMNQ92990 594 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 ARL8AQ96BM9 186 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LINGO1Q96FE5 620 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LINC00615Q96LM1 132 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SELENOSQ9BQE4 189 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SLC13A1Q9BZW2 595 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 LATS2Q9NRM7 1088 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 TM7SF3Q9NS93 570 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 KLC4Q9NSK0 619 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 GALPQ9UBC7 116 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PILRBQ9UKJ0 227 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 SMG5Q9UPR3 1016 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 KCNK6Q9Y257 313 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 MED16Q9Y2X0 877 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 ACOT9Q9Y305 439 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 DHRS7Q9Y394 339 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 PCYT1BQ9Y5K3 369 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 DGKBQ9Y6T7 804 aa8.19□□□□□ -1.1
CNN3-205ENST00000474409 ASCC3Q8N3C0 2202 aaKnown RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
CNN3-205ENST00000474409 CACNA1HO95180 2353 aa8.18□□□□□ -1.1
CNN3-205ENST00000474409 C17orf113A0A1B0GUU1 675 aa8.18□□□□□ -1.1
CNN3-205ENST00000474409 A0A1B0GVT2 93 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms