RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 CARFQ8N187 725 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 CCNYQ8ND76 341 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 BRSK1Q8TDC3 778 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 CPT1BQ92523 772 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 IMP4Q96G21 291 aaKnown RBP16.96■□□□□ 0.31
CUL4A-208ENST00000474116 PPM1MQ96MI6 270 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
CUL4A-208ENST00000474116 PCMTD2Q9NV79 361 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 SPO11Q9Y5K1 396 aa16.96■□□□□ 0.31
CUL4A-208ENST00000474116 MTHFD1P11586 935 aaKnown RBP16.95■□□□□ 0.3
CUL4A-208ENST00000474116 KPNA2P52292 529 aaKnown RBP16.95■□□□□ 0.3
CUL4A-208ENST00000474116 CTSCP53634 463 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 RRADP55042 308 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 PPIDQ08752 370 aaKnown RBP16.95■□□□□ 0.3
CUL4A-208ENST00000474116 RAPSNQ13702 412 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 ATP1A4Q13733 1029 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 GTF2H3Q13889 308 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 PDK2Q15119 407 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 HADHQ16836 314 aaKnown RBP16.95■□□□□ 0.3
CUL4A-208ENST00000474116 ZNF789Q5FWF6 425 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 TMTC4Q5T4D3 741 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 FBXO38Q6PIJ6 1188 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 FAM198BQ6UWH4 519 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 SLC34A3Q8N130 599 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 RASGEF1AQ8N9B8 481 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 KCTD6Q8NC69 237 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 BPIFA1Q9NP55 256 aa16.95■□□□□ 0.3
CUL4A-208ENST00000474116 LCA5LO95447 670 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 CYP1A2P05177 515 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 CA5AP35218 305 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
CUL4A-208ENST00000474116 CDK18Q07002 472 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 NFE2L1Q14494 772 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 METRNLQ641Q3 311 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 IGFL3Q6UXB1 125 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 OOSP2Q86WS3 158 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 TTC30BQ8N4P2 665 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 GDAP1Q8TB36 358 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 DTX3LQ8TDB6 740 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 ZFPM2Q8WW38 1151 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 INPP5DQ92835 1189 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 CLIP3Q96DZ5 547 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 INSM2Q96T92 566 aaPredicted RBP16.94■□□□□ 0.3
CUL4A-208ENST00000474116 IL26Q9NPH9 171 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 SRPK3Q9UPE1 567 aa16.94■□□□□ 0.3
CUL4A-208ENST00000474116 CFAP20Q9Y6A4 193 aaKnown RBP16.94■□□□□ 0.3
CUL4A-208ENST00000474116 DNMT3AQ9Y6K1 912 aaPredicted RBP16.94■□□□□ 0.3
CUL4A-208ENST00000474116 OR6C74A6NCV1 312 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 MYO1FO00160 1098 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 DDX3YO15523 660 aaKnown RBP16.93■□□□□ 0.3
CUL4A-208ENST00000474116 PRF1P14222 555 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 PCSK7Q16549 785 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 NT5DC3Q86UY8 548 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SYTL1Q8IYJ3 562 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 OR1L3Q8NH93 324 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SGSM3Q96HU1 749 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 TTC25Q96NG3 672 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 PHF12Q96QT6 1004 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SRPK1Q96SB4 655 aaKnown RBP16.93■□□□□ 0.3
CUL4A-208ENST00000474116 TLR10Q9BXR5 811 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 CEP41Q9BYV8 373 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SLC25A51Q9H1U9 297 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 IMP3Q9NV31 184 aaKnown RBP16.93■□□□□ 0.3
CUL4A-208ENST00000474116 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 TMEM63CQ9P1W3 806 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SLC24A2Q9UI40 661 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 NTNG1Q9Y2I2 539 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 APCP25054 2843 aa16.93■□□□□ 0.3
CUL4A-208ENST00000474116 SLC9B1P1A6NJY1 282 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 NDST3O95803 873 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 SPTBP11277 2137 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 HNRNPH3P31942 346 aaKnown RBP16.92■□□□□ 0.3
CUL4A-208ENST00000474116 HMGCLP35914 325 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 GJC1P36383 396 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 ARCN1P48444 511 aaKnown RBP16.92■□□□□ 0.3
CUL4A-208ENST00000474116 TAS2R40P59535 323 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 NCF4Q15080 339 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 SLC14A2Q15849 920 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 HGSNATQ68CP4 663 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 DUS1LQ6P1R4 473 aaKnown RBP16.92■□□□□ 0.3
CUL4A-208ENST00000474116 TMEM220Q6QAJ8 160 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 SPATA22Q8NHS9 363 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 AGAP3Q96P47 875 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 ACTR5Q9H9F9 607 aaPredicted RBP16.92■□□□□ 0.3
CUL4A-208ENST00000474116 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 SOHLH2Q9NX45 425 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 COPG1Q9Y678 874 aaKnown RBP16.92■□□□□ 0.3
CUL4A-208ENST00000474116 CROCCQ5TZA2 2017 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 PIKFYVEQ9Y2I7 2098 aa16.92■□□□□ 0.3
CUL4A-208ENST00000474116 F5H423 210 aaPredicted RBP16.91■□□□□ 0.3
CUL4A-208ENST00000474116 UGT1A9O60656 530 aa16.91■□□□□ 0.3
CUL4A-208ENST00000474116 KLF7O75840 302 aaPredicted RBP16.91■□□□□ 0.3
CUL4A-208ENST00000474116 MT-CYBP00156 380 aaPredicted RBP16.91■□□□□ 0.3
CUL4A-208ENST00000474116 MSL3P1P0C860 447 aa16.91■□□□□ 0.3
CUL4A-208ENST00000474116 UGT1A6P19224 532 aa16.91■□□□□ 0.3
CUL4A-208ENST00000474116 UGT1A1P22309 533 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms