RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TUBB2BQ9BVA1 445 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 NUP85Q9BW27 656 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SPATA16Q9BXB7 569 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CHST8Q9H2A9 424 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 PCDH18Q9HCL0 1135 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TRIM39Q9HCM9 518 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ASF1BQ9NVP2 202 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR83Q9NYM4 423 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 NFKBIL1Q9UBC1 381 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 AMACRQ9UHK6 382 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TCFL5Q9UL49 500 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SNX7Q9UNH6 387 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 WDR37Q9Y2I8 494 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TTLL3Q9Y4R7 772 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SPTBP11277 2137 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CNTRLQ7Z7A1 2325 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 CROCCQ5TZA2 2017 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 OR5K3A6NET4 321 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 POM121CA8CG34 1229 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ANKRD66B4E2M5 251 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 MEN1O00255 615 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 VEGFDO43915 354 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 FTLP02792 175 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 HLA-DQB2P05538 268 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TPM2P07951 284 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 CD48P09326 243 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 RARAP10276 462 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 GRNP28799 593 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 RORAP35398 523 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF165P49910 485 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 GSDMDP57764 484 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 HSD11B2P80365 405 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC25A11Q02978 314 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 CDK18Q07002 472 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ABRQ12979 859 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 RAPSNQ13702 412 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ATP1A4Q13733 1029 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 GALNT3Q14435 633 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR19Q15760 415 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 PLEKHN1Q494U1 663 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 CRB2Q5IJ48 1285 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 DNTTIP2Q5QJE6 756 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 VWA5B1Q5TIE3 1220 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 PRAMEF17Q5VTA0 474 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 NCBP2-AS2Q69YL0 99 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 KLHL35Q6PF15 583 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 MED25Q71SY5 747 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TRAPPC5Q8IUR0 188 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM126BQ8IUX1 230 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 DSELQ8IZU8 1212 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 CISD2Q8N5K1 135 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TRAM1L1Q8N609 369 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ZBTB2Q8N680 514 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM102Q8N9M5 508 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 OR8K5Q8NH50 307 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 INPP5DQ92835 1189 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 FATE1Q969F0 183 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF653Q96CK0 615 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF501Q96CX3 271 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 HDAC11Q96DB2 347 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 LRFN5Q96NI6 719 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TSGA13Q96PP4 275 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ERGIC2Q96RQ1 377 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TRIB3Q96RU7 358 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 MLPHQ9BV36 600 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 NLNQ9BYT8 704 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ZFYVE1Q9HBF4 777 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 LATS2Q9NRM7 1088 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 KCND1Q9NSA2 647 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 RBM22Q9NW64 420 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■■■■ 28.1
SNRNP40-204ENST00000474025 C5AR2Q9P296 337 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TRIM10Q9UDY6 481 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 TMPRSS11EQ9UL52 423 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 G3BP2Q9UN86 482 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 ENTPD4Q9Y227 616 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 B3GNT3Q9Y2A9 372 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 NTNG1Q9Y2I2 539 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 SCINQ9Y6U3 715 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 SVILO95425 2214 aa5.01□□□□□ -1.61
SNRNP40-204ENST00000474025 PKDREJQ9NTG1 2253 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 UBA6A0AVT1 1052 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 ARHGAP10A1A4S6 786 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM181BA6NEQ2 426 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 DDX3XO00571 662 aaKnown RBP eCLIP5□□□□□ -1.61
SNRNP40-204ENST00000474025 E2F3O00716 465 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 CDK14O94921 469 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 ZBTB11O95625 1053 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC4A1P02730 911 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 KLK3P07288 261 aaPredicted RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 CCDC172P0C7W6 258 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 PIRTP0C851 137 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 MSL3P1P0C860 447 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 GZMAP12544 262 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 BPIP17213 487 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 VCLP18206 1134 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 IDSP22304 550 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 CCNCP24863 283 aa5□□□□□ -1.61
SNRNP40-204ENST00000474025 HNRNPH3P31942 346 aaKnown RBP5□□□□□ -1.61
SNRNP40-204ENST00000474025 GMPRP36959 345 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms