RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TERB1Q8NA31 727 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 POC5Q8NA72 575 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 TMEM116Q8NCL8 245 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 OR6J1Q8NGC5 347 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ACTRT2Q8TDY3 377 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CREB3L4Q8TEY5 395 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 C2CD4CQ8TF44 421 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 PIGKQ92643 395 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FGF11Q92914 225 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CTHRC1Q96CG8 243 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NXPE2Q96DL1 559 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 VMP1Q96GC9 406 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ZC3HAV1LQ96H79 300 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 COQ10AQ96MF6 247 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ZNF778Q96MU6 729 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 GBP5Q96PP8 586 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NR1H4Q96RI1 486 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 BBS4Q96RK4 519 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SEMA3CQ99985 751 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NUSAP1Q9BXS6 441 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 RABEP2Q9H5N1 569 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FBRSL1Q9HCM7 1045 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 PFDN4Q9NQP4 134 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SNTG1Q9NSN8 517 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SERTAD4Q9NUC0 356 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 C2orf42Q9NWW7 574 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SH3BP4Q9P0V3 963 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 HDAC6Q9UBN7 1215 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FZD4Q9ULV1 537 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NDRG2Q9UN36 371 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 AAR2Q9Y312 384 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 FAM96BQ9Y3D0 163 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SIRT4Q9Y6E7 314 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 EPN1Q9Y6I3 576 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 ZFP37Q9Y6Q3 630 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 NIPBLQ6KC79 2804 aaeCLIP2.39□□□□□ -2.03
CALD1-216ENST00000473714 COL4A2P08572 1712 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 MYO5AQ9Y4I1 1855 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 CLUHO75153 1309 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NOTCH4Q99466 2003 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CEP192Q8TEP8 1941 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PIPSLA2A3N6 862 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 USP17L23D6RBM5 183 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 H0YIZ8 118 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 H7C0S8 307 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 VWA5AO00534 786 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 IPO8O15397 1037 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 PROM1O43490 865 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SLC25A17O43808 307 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HS6ST1O60243 411 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 NDUFS3O75489 264 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GJB3O75712 270 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SLC25A12O75746 678 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SEC31AO94979 1220 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 GGPS1O95749 300 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HSPA4LO95757 839 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 MLYCDO95822 493 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 IGLV2-14P01704 120 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CD63P08962 238 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ELFN1P0C7U0 828 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 STAG3L1P0CL83 205 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HKR1P10072 659 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 VDRP11473 427 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SFTPCP11686 197 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PCNAP12004 261 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CDH2P19022 906 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 TYK2P29597 1187 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CIITAP33076 1130 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ACSL1P33121 698 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GJC1P36383 396 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GRIA3P42263 894 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PTPN9P43378 593 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 LIG4P49917 911 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GALCP54803 685 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 ADPRHP54922 357 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 MFAP4P55083 255 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HDAC4P56524 1084 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HOXA4Q00056 320 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 PSG6Q00889 435 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PLIN5Q00G26 463 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CYP4A11Q02928 519 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 IKQ13123 557 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 MTA1Q13330 715 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SLC14A1Q13336 389 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 GAB1Q13480 694 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 IGFBP7Q16270 282 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 MAPK6Q16659 721 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SMTNL2Q2TAL5 461 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 PRICKLE4Q2TBC4 344 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 C5orf22Q49AR2 442 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 CERKLQ49MI3 558 aaPredicted RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 ZNF667Q5HYK9 610 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 AARS2Q5JTZ9 985 aaKnown RBP2.38□□□□□ -2.03
CALD1-216ENST00000473714 BEND3Q5T5X7 828 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 TSTD2Q5T7W7 516 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 SERTAD4-AS1Q5TG53 156 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 HIST2H2BDQ6DRA6 164 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 NAPEPLDQ6IQ20 393 aa2.38□□□□□ -2.03
CALD1-216ENST00000473714 AADACL2Q6P093 401 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms