RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SPNP16150 400 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SLC7A1P30825 629 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 HOXA6P31267 233 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 QARSP47897 775 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 MARCKSL1P49006 195 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ACOT2P49753 483 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PLA2G16P53816 162 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 EIF4A1P60842 406 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF45Q02386 682 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 GAD2Q05329 585 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 FAPQ12884 760 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PLD1Q13393 1074 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 STARD3Q14849 445 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 NPY5RQ15761 445 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PARP15Q460N3 678 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 RUNDC3AQ59EK9 446 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 FAM76BQ5HYJ3 339 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 NKAPLQ5M9Q1 402 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PDPK2PQ6A1A2 396 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 TIGD3Q6B0B8 471 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PNCKQ6P2M8 343 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 GPR142Q7Z601 462 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ADGRG3Q86Y34 549 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PHC2Q8IXK0 858 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 TCTE3Q8IZS6 198 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LGI2Q8N0V4 545 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PGAM4Q8N0Y7 254 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 OR4D10Q8NGI6 311 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 OR52N1Q8NH53 320 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ETNPPLQ8TBG4 499 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 DEDD2Q8WXF8 326 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LPPQ93052 612 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 MSANTD3Q96H12 275 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 FOPNLQ96NB1 174 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SMAD5Q99717 465 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 APOL4Q9BPW4 351 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CNPY3Q9BT09 278 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 BDH2Q9BUT1 245 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 FUNDC2Q9BWH2 189 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 JAM3Q9BX67 310 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ANO3Q9BYT9 981 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 UCK2Q9BZX2 261 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LHPPQ9H008 270 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZFP14Q9HCL3 533 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 HPS4Q9NQG7 708 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 IFT80Q9P2H3 777 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 MALT1Q9UDY8 824 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 VAV3Q9UKW4 847 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 HSPE1-MOB4S4R3N1 261 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF646O15015 1829 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PQLC2LA1A4F0 135 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 WTIPA6NIX2 430 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LINC00587B1AMM8 73 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 COPEO14579 308 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 TFECO14948 347 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ENTPD3O75355 529 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CLEC2LP0C7M8 214 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 IFI30P13284 250 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 COMTP21964 271 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CALML3P27482 149 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ADSSP30520 456 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 MEOX2P50222 304 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 RPL10AP62906 217 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 MPP1Q00013 466 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CAP1Q01518 475 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 RHDQ02161 417 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 TRIM25Q14258 630 aaKnown RBP5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 KCNJ11Q14654 390 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PDK2Q15119 407 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CHI3L2Q15782 390 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CHRNA2Q15822 529 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SGCAQ16586 387 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 CTF1Q16619 201 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 GEN1Q17RS7 908 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PRR16Q569H4 304 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 XAF1Q6GPH4 301 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZNF425Q6IV72 752 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 GDPD3Q7L5L3 318 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZFPM1Q8IX07 1006 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 OR7G3Q8NG95 312 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 OR4M2Q8NGB6 313 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 OR10T2Q8NGX3 314 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SETD6Q8TBK2 473 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 RAET1EQ8TD07 263 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 DCAKDQ8WVC6 231 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 C1orf54Q8WWF1 131 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 LINC01599Q8WXQ3 324 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ST8SIA4Q92187 359 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SHISA4Q96DD7 197 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ASB9Q96DX5 294 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 ZHX1-C8orf76Q96EF9 292 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SGTBQ96EQ0 304 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 TMEM169Q96HH4 297 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 VCPIP1Q96JH7 1222 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 HSFY1Q96LI6 401 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PWWP2AQ96N64 755 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 SERPINB11Q96P15 392 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 PPP1R2P1Q96PQ5 205 aa5.07□□□□□ -1.6
TMEM39A-206ENST00000473684 EBF4Q9BQW3 602 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms