RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 SCAMP1O15126 338 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 SUPT3HO75486 399 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 FSBPO95073 299 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 STX3Q13277 289 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 MAP7D1Q3KQU3 841 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 LIPMQ5VYY2 423 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 MYO1HQ8N1T3 1032 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 RDH11Q8TC12 318 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 ZNF473Q8WTR7 871 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 FOXJ1Q92949 421 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 GPR174Q9BXC1 333 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TEX101Q9BY14 249 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 ZCCHC2Q9C0B9 1178 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TFB2MQ9H5Q4 396 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TM7SF3Q9NS93 570 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 CDYLQ9Y232 598 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 LRRC14BA6NHZ5 514 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 NDUFAB1O14561 156 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 PI15O43692 258 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TRIM13O60858 407 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 EDF1O60869 148 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 KERAO60938 352 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 FAM107AO95990 144 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 FTH1P02794 183 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 MTHFD2P13995 350 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 DGKAP23743 735 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TRIM23P36406 574 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 RGS4P49798 205 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 HK3P52790 923 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 NAGLUP54802 743 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 ZXDAP98168 799 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 SFSWAPQ12872 951 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 GTF2H3Q13889 308 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TTLL9Q3SXZ7 439 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 FAM219BQ5XKK7 198 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 NEK5Q6P3R8 708 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 SBSNQ6UWP8 590 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 CYHR1Q6ZMK1 362 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 DEFB119Q8N690 84 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 CCNYL1Q8N7R7 359 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 DLG3Q92796 817 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 CLDN23Q96B33 292 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 TMEM237Q96Q45 408 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 ELAC2Q9BQ52 826 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 CCM2Q9BSQ5 444 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 GATA5Q9BWX5 397 aaPredicted RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 C1QTNF7Q9BXJ2 289 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 SHCBP1LQ9BZQ2 653 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 KDM4CQ9H3R0 1056 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 NCKIPSDQ9NZQ3 722 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 MARCOQ9UEW3 520 aaPredicted RBP12.38□□□□□ -0.43
PCCB-211ENST00000473073 MID2Q9UJV3 735 aa12.38□□□□□ -0.43
PCCB-211ENST00000473073 KLF11O14901 512 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 SIX3O95343 332 aaPredicted RBP12.37□□□□□ -0.43
PCCB-211ENST00000473073 FUCA1P04066 466 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 SERPINE1P05121 402 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 ATP5F1P24539 256 aaPredicted RBP12.37□□□□□ -0.43
PCCB-211ENST00000473073 PDHA2P29803 388 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 PHKG1Q16816 387 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 PFKFB4Q16877 469 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 SYTL3Q4VX76 610 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 ATG16L1Q676U5 607 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 SPEM1Q8N4L4 309 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
PCCB-211ENST00000473073 RHEBL1Q8TAI7 183 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 AGR3Q8TD06 166 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 ESAMQ96AP7 390 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 DNAJC16Q9Y2G8 782 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 ANKRD12Q6UB98 2062 aa12.37□□□□□ -0.43
PCCB-211ENST00000473073 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 LATO43561 262 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 VEGFDO43915 354 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 SNNO75324 88 aaPredicted RBP12.36□□□□□ -0.43
PCCB-211ENST00000473073 IPO13O94829 963 aaKnown RBP12.36□□□□□ -0.43
PCCB-211ENST00000473073 APBB3O95704 486 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 GUCA1CO95843 209 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 IGLV3-19P01714 112 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 CHRNGP07510 517 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 KITP10721 976 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 MYCLP1P12525 358 aaPredicted RBP12.36□□□□□ -0.43
PCCB-211ENST00000473073 GFAPP14136 432 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 CD6P30203 668 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 SLC1A6P48664 564 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 OCRLQ01968 901 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 NFE2L1Q14494 772 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 GBX1Q14549 363 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 TCEA2Q15560 299 aa12.36□□□□□ -0.43
PCCB-211ENST00000473073 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
PCCB-211ENST00000473073 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms