RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ELK4P28324 431 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 PKLRP30613 574 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 GRIA1P42261 906 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 ACOT2P49753 483 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 SCNN1GP51170 649 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 ALDH3A2P51648 485 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 IRF9Q00978 393 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 PLCL1Q15111 1095 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 NFE2Q16621 373 aaPredicted RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 COQ5Q5HYK3 327 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 R3HCC1LQ7Z5L2 792 aaKnown RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 SPPL2CQ8IUH8 684 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 Q8N9G6 341 aaPredicted RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 OR13J1Q8NGT2 312 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 HMGCLL1Q8TB92 370 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 DYNC2LI1Q8TCX1 351 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 TMEM143Q96AN5 459 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 EGLN2Q96KS0 407 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 MUS81Q96NY9 551 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 DHX35Q9H5Z1 703 aaKnown RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 C12orf10Q9HB07 376 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 STMN3Q9NZ72 180 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 PDE10AQ9Y233 779 aa9.98□□□□□ -0.81
APTX-216ENST00000472896 ZFP37Q9Y6Q3 630 aaPredicted RBP9.98□□□□□ -0.81
APTX-216ENST00000472896 USP24Q9UPU5 2620 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CHD8Q9HCK8 2581 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 NOTCH4Q99466 2003 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 FAM149AA5PLN7 773 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 C2CD4BA6NLJ0 364 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 TARM1B6A8C7 271 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 SLC30A4O14863 429 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CCL16O15467 120 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 ADAM12O43184 909 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 MTSS1O43312 755 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 ICMTO60725 284 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 DLGAP3O95886 979 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 JUNP05412 331 aaKnown RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 THRBP10828 461 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 SHMT2P34897 504 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CLK3P49761 638 aaKnown RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 SESN2P58004 480 aaPredicted RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 CLCQ05315 142 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 MTAPQ13126 283 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 DUSP7Q16829 419 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 C6orf141Q5SZD1 244 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 FUT10Q6P4F1 479 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 RSPO2Q6UXX9 243 aaPredicted RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 CHST15Q7LFX5 561 aaPredicted RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 CDR2LQ86X02 465 aaPredicted RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 GRAMD2AQ8IUY3 354 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 FAM20CQ8IXL6 584 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 TMEM151AQ8N4L1 468 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 OR5B17Q8NGF7 314 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 RXFP2Q8WXD0 754 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 MFSD3Q96ES6 412 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 SCYL1Q96KG9 808 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 FAM84AQ96KN4 292 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 ZNF560Q96MR9 790 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CYP2S1Q96SQ9 504 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 COLEC11Q9BWP8 271 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 DSN1Q9H410 356 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 TM9SF3Q9HD45 589 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
APTX-216ENST00000472896 SYBUQ9NX95 663 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 CYTH4Q9UIA0 394 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 IPPQ9Y573 584 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 A3GALT2U3KPV4 340 aa9.97□□□□□ -0.81
APTX-216ENST00000472896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.96□□□□□ -0.81
APTX-216ENST00000472896 TCRBV5S2A0A599 114 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 NME4O00746 187 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 ARPC2O15144 300 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 MRPS14O60783 128 aaKnown RBP9.96□□□□□ -0.81
APTX-216ENST00000472896 SUPT7LO94864 414 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 NDST3O95803 873 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 FYNP06241 537 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 SBK3P0C264 359 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 PDGFRAP16234 1089 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 CYP2F1P24903 491 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 RRM2P31350 389 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 GALNT1Q10472 559 aaPredicted RBP9.96□□□□□ -0.81
APTX-216ENST00000472896 DAG1Q14118 895 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 CRY1Q16526 586 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.81
APTX-216ENST00000472896 AGAP6Q5VW22 663 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 TPRG1Q6ZUI0 275 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 PROSER1Q86XN7 944 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 PTRH1Q86Y79 214 aaKnown RBP9.96□□□□□ -0.81
APTX-216ENST00000472896 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 POC5Q8NA72 575 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 ZNF555Q8NEP9 628 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 HTR3CQ8WXA8 447 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 CCDC126Q96EE4 140 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 AGAP4Q96P64 663 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 IL12RB2Q99665 862 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 GPR22Q99680 433 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 FEM1AQ9BSK4 669 aa9.96□□□□□ -0.81
APTX-216ENST00000472896 MCMBPQ9BTE3 642 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms