RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MLST8Q9BVC4 326 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 MTMR12Q9C0I1 747 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 SPATC1LQ9H0A9 340 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 FAM234AQ9H0X4 552 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 PPP1R3EQ9H7J1 279 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 NOL11Q9H8H0 719 aaKnown RBP2.64□□□□□ -1.99
XRN1-210ENST00000472697 SFXN1Q9H9B4 322 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 AIPL1Q9NZN9 384 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 RNF181Q9P0P0 153 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 IL19Q9UHD0 177 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 ITGA11Q9UKX5 1188 aa2.64□□□□□ -1.99
XRN1-210ENST00000472697 PARP4Q9UKK3 1724 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 CPED1A4D0V7 1026 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SH3D21A4FU49 640 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CCDC151A5D8V7 595 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 HTR3EA5X5Y0 456 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 E7ENX8 843 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 PSMA7O14818 248 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CLDN7O95471 211 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 C8orf89P0DMQ9 161 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DLATP10515 647 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 TNNT1P13805 278 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 KELP23276 732 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DUSP1P28562 367 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CCND3P30281 292 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 SFNP31947 248 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CASP3P42574 277 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SERPINH1P50454 418 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 RAB28P51157 221 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 GMFBP60983 142 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 TAP2Q03519 686 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 RAPSNQ13702 412 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 GALNT3Q14435 633 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 C2orf76Q3KRA6 126 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ODF3L2Q3SX64 289 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 RABL6Q3YEC7 729 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 USP39Q53GS9 565 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 PAPPA-AS1Q5QFB9 102 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 C6orf136Q5SQH8 315 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 RNASEH2BQ5TBB1 312 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 TMEM71Q6P5X7 295 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DCDC5Q6ZRR9 648 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 TMPRSS11BQ86T26 416 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 AMZ2Q86W34 360 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DZIP1Q86YF9 867 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 KIAA0895Q8NCT3 520 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 HM13Q8TCT9 377 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 TEKT1Q969V4 418 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 EEF2KMTQ96G04 330 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 Q96MF0 132 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ZNF582Q96NG8 517 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 MUS81Q96NY9 551 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 RAB3IPQ96QF0 476 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 CRACR2AQ9BSW2 395 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 S1PR5Q9H228 398 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DENND2DQ9H6A0 471 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 SLC35D1Q9NTN3 355 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ACSS1Q9NUB1 689 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 SEMA5BQ9P283 1151 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ADAM21Q9UKJ8 722 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SBF2Q86WG5 1849 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 FAM205AQ6ZU69 1335 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 A0A1W2PRG0 241 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 FAM157AC9JC47 383 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 AKR1B15C9JRZ8 316 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 CACNB4O00305 520 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 TIMM23O14925 209 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SLC16A3O15427 465 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 NOBOXO60393 691 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CYP7B1O75881 506 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 AK1P00568 194 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 WNT1P04628 370 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 NUDT17P0C025 328 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SMIM18P0DKX4 95 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 HSPA5P11021 654 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 INSRRP14616 1297 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CDH2P19022 906 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 HOXA7P31268 230 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 HIBADHP31937 336 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 PLCD1P51178 756 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CYP2J2P51589 502 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 TPD52P55327 224 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 ANXA2RQ3ZCQ2 193 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 AARDQ4LEZ3 155 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 CCDC183Q5T5S1 534 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 NT5DC1Q5TFE4 455 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 HMBOX1Q6NT76 420 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 BTNL8Q6UX41 500 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 PQLC2Q6ZP29 291 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ADGRD2Q7Z7M1 963 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 ATG4DQ86TL0 474 aaPredicted RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 TSPAN33Q86UF1 283 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 LONP2Q86WA8 852 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 FOXRED2Q8IWF2 684 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 RTL3Q8N8U3 475 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 SRFBP1Q8NEF9 429 aaKnown RBP2.63□□□□□ -1.99
XRN1-210ENST00000472697 OLIG1Q8TAK6 271 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 SLC44A1Q8WWI5 657 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 METTL21AQ8WXB1 218 aa2.63□□□□□ -1.99
XRN1-210ENST00000472697 DACT3Q96B18 629 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms