RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 HLA-FP30511 346 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SSTR2P30874 369 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 DRD3P35462 400 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SOX6P35712 828 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ATP6V1E1P36543 226 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PPP3CCP48454 512 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GPR85P60893 370 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 DLG4P78352 724 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GBE1Q04446 702 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 MCL1Q07820 350 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 OVGP1Q12889 678 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ADAM9Q13443 819 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FZD2Q14332 565 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SQLEQ14534 574 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 TMEM132DQ14C87 1099 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 EIF4HQ15056 248 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CNGA2Q16280 664 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 RGS21Q2M5E4 152 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 KLHL40Q2TBA0 621 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CEP78Q5JTW2 689 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF658Q5TYW1 1059 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CPZQ66K79 652 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 C6orf89Q6UWU4 347 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GCNT7Q6ZNI0 430 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PLEKHM3Q6ZWE6 761 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 YTHDF3Q7Z739 585 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PRPF39Q86UA1 669 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ADIPOR2Q86V24 386 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FJX1Q86VR8 437 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 HOOK3Q86VS8 718 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CATSPER3Q86XQ3 398 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CCDC103Q8IW40 242 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SFTPA2Q8IWL1 248 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 AHI1Q8N157 1196 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SCAIQ8N9R8 606 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 NAXEQ8NCW5 288 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ENKURQ8TC29 256 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PLEKHO2Q8TD55 490 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 DENND1AQ8TEH3 1009 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ALG3Q92685 438 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 NAT6Q93015 286 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FBXO32Q969P5 355 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PCED1BQ96HM7 432 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 MED30Q96HR3 178 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FUBP3Q96I24 572 aaKnown RBP eCLIP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SLITRK1Q96PX8 696 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CDRT15Q96T59 188 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PRPF18Q99633 342 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ZNF518BQ9C0D4 1074 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CCSER1Q9C0I3 900 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CDH19Q9H159 772 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 WNT5BQ9H1J7 359 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 VPS11Q9H270 941 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 LRRN3Q9H3W5 708 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GOLPH3LQ9H4A5 285 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 EPB41L1Q9H4G0 881 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SLAMF7Q9NQ25 335 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ABCF3Q9NUQ8 709 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 OSER1Q9NX31 292 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PDP2Q9P2J9 529 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 RASAL2Q9UJF2 1139 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FZD4Q9ULV1 537 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 NTNG1Q9Y2I2 539 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 MAGED1Q9Y5V3 778 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 RNF215Q9Y6U7 377 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 X6R8D5 127 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ZGRF1Q86YA3 2104 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 KLF18A0A0U1RQI7 1052 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 MYOCOSA0A1B0GUC4 107 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 A0A1B0GVC2 190 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 A6NNZ2 444 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 RNF212BA8MTL3 300 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 STX16-NPEPL1H3BU86 382 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 J3KRW8 73 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 CACNB4O00305 520 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 ETV2O00321 342 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 RTCAO00442 366 aaKnown RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 APOL1O14791 398 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 GSTA4O15217 222 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 CLDN3O15551 220 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 MAGEC1O60732 1142 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 DTNBO60941 627 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 FBXO21O94952 628 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 CSF2P04141 144 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 ADRB2P07550 413 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 HMBSP08397 361 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 PNMA6AP0CW24 399 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 ZSCAN22P10073 491 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 H2AFXP16104 143 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 CTRB1P17538 263 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 PTPN1P18031 435 aaKnown RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 CAPN3P20807 821 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 TNFAIP3P21580 790 aa4.37□□□□□ -1.71
LMNB1-205ENST00000472034 EEF1GP26641 437 aaKnown RBP4.37□□□□□ -1.71
LMNB1-205ENST00000472034 YWHAQP27348 245 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms