RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 OLIG2Q13516 323 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 METRNLQ641Q3 311 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 DARS2Q6PI48 645 aaKnown RBP22.07■■□□□ 1.12
C9orf3-213ENST00000471978 RASGRP3Q8IV61 690 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 ELMO2Q96JJ3 720 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 ASB8Q9H765 288 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 FKBPLQ9UIM3 349 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 KCTD3Q9Y597 815 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 RPS6KL1Q9Y6S9 549 aa22.07■■□□□ 1.12
C9orf3-213ENST00000471978 ZNF106Q9H2Y7 1883 aaKnown RBP22.07■■□□□ 1.12
C9orf3-213ENST00000471978 C5orf60A6NFR6 353 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 SRP72O76094 671 aaKnown RBP22.06■■□□□ 1.12
C9orf3-213ENST00000471978 CETN2P41208 172 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 PPP1CAP62136 330 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 MC1RQ01726 317 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 KCNC4Q03721 635 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 CDC20Q12834 499 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 PLCL1Q15111 1095 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 KLHL35Q6PF15 583 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 C6orf15Q6UXA7 325 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-213ENST00000471978 ATG14Q6ZNE5 492 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 STARD8Q92502 1023 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 MRFAP1L1Q96HT8 127 aa22.06■■□□□ 1.12
C9orf3-213ENST00000471978 IMP3Q9NV31 184 aaKnown RBP22.06■■□□□ 1.12
C9orf3-213ENST00000471978 REXO2Q9Y3B8 237 aaKnown RBP22.06■■□□□ 1.12
C9orf3-213ENST00000471978 BTNL10A8MVZ5 291 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 SUV39H1O43463 412 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 TJP3O95049 919 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 WISP1O95388 367 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 MTHFD1P11586 935 aaKnown RBP22.05■■□□□ 1.12
C9orf3-213ENST00000471978 NELFEP18615 380 aaKnown RBP22.05■■□□□ 1.12
C9orf3-213ENST00000471978 AADACL2Q6P093 401 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 GALNT6Q8NCL4 622 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 CCDC110Q8TBZ0 833 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 NAT14Q8WUY8 206 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 STAMBPL1Q96FJ0 436 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 SPATA13Q96N96 652 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 TRIM4Q9C037 500 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 WWP1Q9H0M0 922 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 CLMPQ9H6B4 373 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 TUBD1Q9UJT1 453 aa22.05■■□□□ 1.12
C9orf3-213ENST00000471978 CFAP20Q9Y6A4 193 aaKnown RBP22.05■■□□□ 1.12
C9orf3-213ENST00000471978 UBR5O95071 2799 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-213ENST00000471978 MGAT4DA6NG13 374 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 KIAA0754O94854 1291 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 CRTAMO95727 393 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 PYGMP11217 842 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 FGF5P12034 268 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 TCN2P20062 427 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 OAS2P29728 719 aaKnown RBP22.04■■□□□ 1.12
C9orf3-213ENST00000471978 PDE1BQ01064 536 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 C16orf46Q6P387 395 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 RAD9BQ6WBX8 426 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 PPP1R3BQ86XI6 285 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 OR2L2Q8NH16 312 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 UBXN4Q92575 508 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 ALG3Q92685 438 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 PPP1R2P1Q96PQ5 205 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 INSM2Q96T92 566 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-213ENST00000471978 LACRTQ9GZZ8 138 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 FAM8A1Q9UBU6 413 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 LNPEPQ9UIQ6 1025 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 ACSL5Q9ULC5 683 aa22.04■■□□□ 1.12
C9orf3-213ENST00000471978 MRPS18BQ9Y676 258 aaKnown RBP22.04■■□□□ 1.12
C9orf3-213ENST00000471978 IGHV5-51A0A0C4DH38 117 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 KLHL33A6NCF5 533 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 SPAG6O75602 509 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 F8A1P23610 371 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 DLSTP36957 453 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 XIAPP98170 497 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 DEFB109BQ30KR1 87 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.03■■□□□ 1.12
C9orf3-213ENST00000471978 BCL7AQ4VC05 210 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 CYB5D1Q6P9G0 228 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 LRRC57Q8N9N7 239 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 SIDT2Q8NBJ9 832 aaKnown RBP22.03■■□□□ 1.12
C9orf3-213ENST00000471978 ACRBPQ8NEB7 543 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 OR13C4Q8NGS5 318 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 DCUN1D1Q96GG9 259 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 C12orf66Q96MD2 445 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 TBL1YQ9BQ87 522 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 SEMA5BQ9P283 1151 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 CRLS1Q9UJA2 301 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 CROTQ9UKG9 612 aa22.03■■□□□ 1.12
C9orf3-213ENST00000471978 GRID2IPA4D2P6 1211 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 TERTO14746 1132 aaKnown RBP22.02■■□□□ 1.12
C9orf3-213ENST00000471978 VAV2P52735 878 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 TMPRSS15P98073 1019 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 MSLNQ13421 630 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-213ENST00000471978 SPARCL1Q14515 664 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 CRTC2Q53ET0 693 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-213ENST00000471978 ATP1A1-AS1Q5TC04 95 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 DENND5AQ6IQ26 1287 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 DUS1LQ6P1R4 473 aaKnown RBP22.02■■□□□ 1.12
C9orf3-213ENST00000471978 ULK4Q96C45 1275 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 LRRC45Q96CN5 670 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 SLC41A2Q96JW4 573 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 RBSNQ9H1K0 784 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 PDE7BQ9NP56 450 aa22.02■■□□□ 1.12
C9orf3-213ENST00000471978 HRASLS2Q9NWW9 162 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms