RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 IGHV1OR15-9A0A0B4J2B8 117 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 CFAP73A6NFT4 308 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 C16orf96A6NNT2 1141 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 PLK4O00444 970 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 MID1O15344 667 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 RNASEH1O60930 286 aaKnown RBP17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UNC5CO95185 931 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 CTSLP07711 333 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 C1SP09871 688 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UGT1A6P19224 532 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UGT1A1P22309 533 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UGT1A4P22310 534 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UGT1A3P35503 534 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 UGT1A5P35504 534 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 NSG1P42857 185 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 ELAVL3Q14576 367 aaKnown RBP17.24■□□□□ 0.35
HSPG2-208ENST00000471322 KRT72Q14CN4 511 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 TBCCQ15814 346 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 PLK5Q496M5 336 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF776Q68DI1 518 aaPredicted RBP17.24■□□□□ 0.35
HSPG2-208ENST00000471322 DPPA4Q7L190 304 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 AFAP1L2Q8N4X5 818 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 CD200R1Q8TD46 325 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 FAR2Q96K12 515 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 COPS8Q99627 209 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 KLHL42Q9P2K6 505 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 NFKBIL1Q9UBC1 381 aaPredicted RBP17.24■□□□□ 0.35
HSPG2-208ENST00000471322 SERGEFQ9UGK8 458 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 RAB23Q9ULC3 237 aa17.24■□□□□ 0.35
HSPG2-208ENST00000471322 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 PROB1E7EW31 1015 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 FCHO1O14526 889 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 HDAC3O15379 428 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 DNTTP04053 509 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 SERPINA6P08185 405 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 LIG3P49916 1009 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 IDH3AP50213 366 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 CLCN7P51798 805 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 RPL6Q02878 288 aaKnown RBP17.23■□□□□ 0.35
HSPG2-208ENST00000471322 CST6Q15828 149 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 CCDC6Q16204 474 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 ATG14Q6ZNE5 492 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 DSG4Q86SJ6 1040 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 SIDT2Q8NBJ9 832 aaKnown RBP17.23■□□□□ 0.35
HSPG2-208ENST00000471322 FAM136AQ96C01 138 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 TOE1Q96GM8 510 aaKnown RBP17.23■□□□□ 0.35
HSPG2-208ENST00000471322 ATOH8Q96SQ7 321 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 DUSP15Q9H1R2 295 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-208ENST00000471322 FAM83DQ9H4H8 585 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 ITM2CQ9NQX7 267 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 USP36Q9P275 1121 aaKnown RBP17.23■□□□□ 0.35
HSPG2-208ENST00000471322 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 RNF112Q9ULX5 631 aa17.23■□□□□ 0.35
HSPG2-208ENST00000471322 FAM186AA6NE01 2351 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 GVINP1Q7Z2Y8 2422 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 A0A1W2PP55 124 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 NEMP2A6NFY4 417 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 H0YHG0 523 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 MATN2O00339 956 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF195O14628 629 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 GFRA3O60609 400 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF217O75362 1048 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 CHRNGP07510 517 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 KCNC1P48547 511 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 RGS4P49798 205 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 HERVK_113P63132 956 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 OR4D1Q15615 310 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 METTL21CQ5VZV1 264 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 SEL1L3Q68CR1 1132 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 EPGNQ6UW88 154 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 LSMEM2Q8N112 164 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 PHF21BQ96EK2 531 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 LINGO1Q96FE5 620 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 PPP1R16AQ96I34 528 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 TMEM237Q96Q45 408 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 ERVK-6Q9BXR3 956 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 CYP4F12Q9HCS2 524 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 SMOXQ9NWM0 555 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 CAPN7Q9Y6W3 813 aa17.22■□□□□ 0.35
HSPG2-208ENST00000471322 PSMD11O00231 422 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 RNASEH2AO75792 299 aaKnown RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 TSPAN12O95859 305 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 DGKAP23743 735 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ITGB7P26010 798 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 NCALDP61601 193 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 SEMG2Q02383 582 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 TTLL9Q3SXZ7 439 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ZNF678Q5SXM1 525 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 FRMD7Q6ZUT3 714 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ALYREFQ86V81 257 aaKnown RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 NRSN1Q8IZ57 195 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 KLHL29Q96CT2 875 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 NSL1Q96IY1 281 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 COG4Q9H9E3 785 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 SARS2Q9NP81 518 aaKnown RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 LATS2Q9NRM7 1088 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 SPATS2LQ9NUQ6 558 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms