RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZNF843Q8N446 348 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 COG1Q8WTW3 980 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1-211ENST00000471260 ALG3Q92685 438 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 NKD1Q969G9 470 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 SPATA13Q96N96 652 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 TBC1D10AQ9BXI6 508 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 ARNT2Q9HBZ2 717 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 SLC40A1Q9NP59 571 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 SCHIP1Q9P0W5 487 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF624Q9P2J8 865 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-211ENST00000471260 DNAJC16Q9Y2G8 782 aa13.26□□□□□ -0.29
HMGN1-211ENST00000471260 A8MU76 341 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 H3BQF6 201 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 GAPDHSO14556 408 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 CAPN5O15484 640 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A9O60656 530 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 PRB1P04280 392 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 BRAFP15056 766 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 AMD1P17707 334 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A6P19224 532 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A1P22309 533 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A4P22310 534 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 RPL10P27635 214 aaKnown RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A3P35503 534 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 HADHAP40939 763 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 PLA2G4EQ3MJ16 856 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 SNAP47Q5SQN1 464 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 GPRC6AQ5T6X5 926 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 KIAA1614Q5VZ46 1190 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 BEND7Q8N7W2 519 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 RASGEF1AQ8N9B8 481 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 EIF1ADQ8N9N8 165 aaKnown RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF398Q8TD17 642 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 CXorf40BQ96DE9 158 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 RTP4Q96DX8 246 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 MED8Q96G25 268 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 C9orf72Q96LT7 481 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 OSBPL9Q96SU4 736 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 GORASP1Q9BQQ3 440 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 FICDQ9BVA6 458 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 RAB33BQ9H082 229 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 TRIT1Q9H3H1 467 aaKnown RBP13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A7Q9HAW7 530 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A10Q9HAW8 530 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 UGT1A8Q9HAW9 530 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 EPHA6Q9UF33 1036 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 CAPN6Q9Y6Q1 641 aa13.25□□□□□ -0.29
HMGN1-211ENST00000471260 SDK2Q58EX2 2172 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 AGAP14A8MT82 685 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 POP7O75817 140 aaKnown RBP13.24□□□□□ -0.29
HMGN1-211ENST00000471260 SRP72O76094 671 aaKnown RBP13.24□□□□□ -0.29
HMGN1-211ENST00000471260 PRAMEF1O95521 474 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 MAP4P27816 1152 aaKnown RBP13.24□□□□□ -0.29
HMGN1-211ENST00000471260 PSMB4P28070 264 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 MAPK9P45984 424 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 MSLNQ13421 630 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-211ENST00000471260 CLCA4Q14CN2 919 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 SEPT7Q16181 437 aaKnown RBP13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ANKS6Q68DC2 871 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 CYB5D1Q6P9G0 228 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 TMEM220Q6QAJ8 160 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ZNF605Q86T29 641 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 CREG2Q8IUH2 290 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 IL22RA1Q8N6P7 574 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 OR4K2Q8NGD2 314 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 HEXDCQ8WVB3 486 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ZFPM2Q8WW38 1151 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 EFHD1Q9BUP0 239 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 SPRY4Q9C004 299 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 PILRAQ9UKJ1 303 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ADAM21Q9UKJ8 722 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 ARL5AQ9Y689 179 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 COL6A6A6NMZ7 2263 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 BAHCC1Q9P281 2608 aa13.24□□□□□ -0.29
HMGN1-211ENST00000471260 POLR1CO15160 346 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 BUD23O43709 281 aaKnown RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 RALBP11234 206 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 SFTPCP11686 197 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 MSH3P20585 1137 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 CAPZBP47756 277 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 CTSCP53634 463 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 DRG2P55039 364 aaKnown RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 KLF1Q13351 362 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-211ENST00000471260 PARP6Q2NL67 630 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 TUBB8Q3ZCM7 444 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 METRNLQ641Q3 311 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 VASH2Q86V25 355 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 CACNA2D3Q8IZS8 1091 aa13.23□□□□□ -0.29
HMGN1-211ENST00000471260 NLGN4XQ8N0W4 816 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms