RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 USP39Q53GS9 565 aaKnown RBP8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ACSBG2Q5FVE4 666 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 SLC36A4Q6YBV0 504 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ABI3BPQ7Z7G0 1075 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ADAMTSL2Q86TH1 951 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 TAX1BP1Q86VP1 789 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 TRAPPC5Q8IUR0 188 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ZNF547Q8IVP9 402 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 SPNS2Q8IVW8 549 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDLBP-233ENST00000470710 MYO1HQ8N1T3 1032 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 CCDC63Q8NA47 563 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 RAB3IL1Q8TBN0 382 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 FAM174AQ8TBP5 190 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 STAG3L4Q8TBR4 150 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 EEF1AKMT1Q8WVE0 214 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ASZ1Q8WWH4 475 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 RLN3Q8WXF3 142 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ELMO1Q92556 727 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 FOXJ1Q92949 421 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 PTERQ96BW5 349 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 BMFQ96LC9 184 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 LGR4Q9BXB1 951 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 GPR174Q9BXC1 333 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ALG9Q9H6U8 611 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 FZD3Q9NPG1 666 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 PSD3Q9NYI0 1048 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 SLC17A4Q9Y2C5 497 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-233ENST00000470710 TMEM98Q9Y2Y6 226 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 TECTAO75443 2155 aa8.56□□□□□ -1.04
HDLBP-233ENST00000470710 BDP1A6H8Y1 2624 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 PLXNB3Q9ULL4 1909 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 A0A1W2PPC4 97 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 SLC5A10A0PJK1 596 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 POM121BA6NF01 834 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 MGAT4DA6NG13 374 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 SYCE1LA8MT33 242 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 METTL12A8MUP2 240 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 BTN3A1O00481 513 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TNFRSF10CO14798 259 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 LIN7AO14910 233 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 KCNJ13O60928 360 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 NDUFS2O75306 463 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 H2AFYO75367 372 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 CEACAM5P06731 702 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TDGF1P13385 188 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TAC1P20366 129 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 KELP23276 732 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ATP5F1P24539 256 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ALDH3A1P30838 453 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 MAPK9P45984 424 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 RABIFP47224 123 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 PXNP49023 591 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 DNAJB13P59910 316 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 NFKB2Q00653 900 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ASPHQ12797 758 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 RPA4Q13156 261 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 SP140Q13342 867 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 NFATC4Q14934 902 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 PCLAFQ15004 111 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 OR4D1Q15615 310 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TSNQ15631 228 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TTC19Q6DKK2 380 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 DOK6Q6PKX4 331 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 CYHR1Q6ZMK1 362 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 GCNT7Q6ZNI0 430 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 PIWIL4Q7Z3Z4 852 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 C11orf96Q7Z7L8 435 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 LRRTM4Q86VH4 590 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 RASGRP3Q8IV61 690 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 NUDCD3Q8IVD9 361 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 C10orf107Q8IVU9 208 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 OXR1Q8N573 874 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 BEND7Q8N7W2 519 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 OR2L2Q8NH16 312 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 HM13Q8TCT9 377 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 LRRC8CQ8TDW0 803 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 SREK1Q8WXA9 508 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ZNF75CPQ92670 426 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 GLMNQ92990 594 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TMEM159Q96B96 161 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 BIRC7Q96CA5 298 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 CCDC126Q96EE4 140 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ZNF317Q96PQ6 595 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ATOH8Q96SQ7 321 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ORAI3Q9BRQ5 295 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 UNKQ9C0B0 810 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 MANSC1Q9H8J5 431 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 EBF2Q9HAK2 575 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 SPATA6Q9NWH7 488 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 OXSMQ9NWU1 459 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 CPSF2Q9P2I0 782 aaKnown RBP8.55□□□□□ -1.04
HDLBP-233ENST00000470710 IKZF3Q9UKT9 509 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 TMCO1Q9UM00 188 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 CDYLQ9Y232 598 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
HDLBP-233ENST00000470710 LRRK1Q38SD2 2015 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms