RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SEPHS2Q99611 448 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 GORASP2Q9H8Y8 452 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 POLR1BQ9H9Y6 1135 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 SMPD4Q9NXE4 827 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 IL17CQ9P0M4 197 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 DEAF1O75398 565 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 HPRP00739 348 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 RHOCP08134 193 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 MSH3P20585 1137 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ENTPD1P49961 510 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ARPP19P56211 112 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ARF5P84085 180 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 TRAF3Q13114 568 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 DUSP4Q13115 394 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ZRANB3Q5FWF4 1079 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 KCTD8Q6ZWB6 473 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 METTL6Q8TCB7 284 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 OVCA2Q8WZ82 227 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 VPS50Q96JG6 964 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 IFT80Q9P2H3 777 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 PCDHB1Q9Y5F3 818 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 GLUD1P00367 558 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ALBP02768 609 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 MT-ND1P03886 318 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 KLKB1P03952 638 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 INHBBP09529 407 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 RPS3P23396 243 aaKnown RBP eCLIP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 CASP2P42575 452 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 FLT3LGP49771 235 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 SGSHP51688 502 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 CACNG1Q06432 222 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 GTF2H2Q13888 395 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 CXorf57Q6NSI4 855 aaKnown RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 GTF2H2CQ6P1K8 395 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 IL27RAQ6UWB1 636 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 DCBLD1Q8N8Z6 715 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 OR13F1Q8NGS4 319 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 GIPC2Q8TF65 315 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 PLD4Q96BZ4 506 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ARHGAP39Q9C0H5 1083 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 SOX17Q9H6I2 414 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF711Q9Y462 761 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 THSD7BQ9C0I4 1608 aa13.45□□□□□ -0.26
BRCA1-209ENST00000470026 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-209ENST00000470026 A0A1B0GVM2 712 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 E5RI56 91 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 PRMT5O14744 637 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-209ENST00000470026 GJB5O95377 273 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 OTCP00480 354 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 FCGRTP55899 365 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 MTPNP58546 118 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-209ENST00000470026 AP5B1Q2VPB7 878 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-209ENST00000470026 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 Q6ZNX1 250 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 ITFG1Q8TB96 612 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 TMBIM1Q969X1 311 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 EID2BQ96D98 161 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 C19orf43Q9BQ61 176 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 BPIFA1Q9NP55 256 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 LHX3Q9UBR4 397 aa13.44□□□□□ -0.26
BRCA1-209ENST00000470026 ANKRD12Q6UB98 2062 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 IQCF5A8MTL0 148 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 FFAR2O15552 330 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 HMOX2P30519 316 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 SHMT2P34897 504 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 POLR2IP36954 125 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 ABRAXAS2Q15018 415 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 C18orf21Q32NC0 220 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 FAM98BQ52LJ0 330 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 GPR107Q5VW38 600 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TMEM214Q6NUQ4 689 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 FUT10Q6P4F1 479 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF783Q6ZMS7 281 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 DENND1CQ8IV53 801 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 EFHBQ8N7U6 833 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF548Q8NEK5 533 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 PDZD8Q8NEN9 1154 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 AURKBQ96GD4 344 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 MUS81Q96NY9 551 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 CASD1Q96PB1 797 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 ASIC5Q9NY37 505 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms