RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ZDHHC12Q96GR4 267 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 LINC00615Q96LM1 132 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 BAG1Q99933 345 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 TBL1YQ9BQ87 522 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 ARHGAP9Q9BRR9 750 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 TRIT1Q9H3H1 467 aaKnown RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 ASB8Q9H765 288 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 GPN2Q9H9Y4 310 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 FEZ2Q9UHY8 353 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 PSMD13Q9UNM6 376 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 KLHL33A6NCF5 533 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 CRTAMO95727 393 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 MTHFD1P11586 935 aaKnown RBP15.95■□□□□ 0.14
COL9A3-208ENST00000469802 SFTPCP11686 197 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 CETN2P41208 172 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 SEPHS1P49903 392 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 PDE1BQ01064 536 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 IL11RAQ14626 422 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 GAS2L3Q86XJ1 694 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 ESX1Q8N693 406 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 OR13C4Q8NGS5 318 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 OR2L2Q8NH16 312 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 KIAA1143Q96AT1 154 aaPredicted RBP15.95■□□□□ 0.14
COL9A3-208ENST00000469802 ADNPQ9H2P0 1102 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
COL9A3-208ENST00000469802 AMFRQ9UKV5 643 aa15.95■□□□□ 0.14
COL9A3-208ENST00000469802 A0A0U1RQJ8 604 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 MIF4GDA9UHW6 222 aaKnown RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 DDX3YO15523 660 aaKnown RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 LDB2O43679 373 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 RASSF9O75901 435 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 FGF5P12034 268 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 ZNF28P17035 718 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 NELFEP18615 380 aaKnown RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 PBLDP30039 288 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 PRLHRP49683 370 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 FOXM1Q08050 763 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 NFATC3Q12968 1075 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 CRTC2Q53ET0 693 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 CACHD1Q5VU97 1274 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 IRGCQ6NXR0 463 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 DET1Q7L5Y6 550 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 PEX26Q7Z412 305 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 KIAA1328Q86T90 577 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 UNC5BQ8IZJ1 945 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 NXPE1Q8N323 547 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 TTC13Q8NBP0 860 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 SLC35B2Q8TB61 432 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 NAT14Q8WUY8 206 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 ULK4Q96C45 1275 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 SLC41A2Q96JW4 573 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 RMDN2Q96LZ7 410 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 OR6C1Q96RD1 312 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 EFHD1Q9BUP0 239 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 ULBP3Q9BZM4 244 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 IL17BQ9UHF5 180 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 ACSL5Q9ULC5 683 aa15.94■□□□□ 0.14
COL9A3-208ENST00000469802 PACSIN2Q9UNF0 486 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 SETXQ7Z333 2677 aaKnown RBP15.94■□□□□ 0.14
COL9A3-208ENST00000469802 IGLV3-16A0A075B6K0 115 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 TRBV5-4A0A0C4DH59 114 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 OR5K3A6NET4 321 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 TERTO14746 1132 aaKnown RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 HADHAP40939 763 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 CDC20Q12834 499 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 SPARCL1Q14515 664 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 ZNF658BQ4V348 819 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 DUS1LQ6P1R4 473 aaKnown RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 KLHL35Q6PF15 583 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 SNX20Q7Z614 316 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 SYCE1Q8N0S2 351 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 UBL4BQ8N7F7 174 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 ZFPM2Q8WW38 1151 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 STARD8Q92502 1023 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 UBXN4Q92575 508 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 CATSPER2Q96P56 530 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 INSM2Q96T92 566 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 CD180Q99467 661 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 DESI2Q9BSY9 194 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 WWP1Q9H0M0 922 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 IMP3Q9NV31 184 aaKnown RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 CRLS1Q9UJA2 301 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 R3HDM2Q9Y2K5 976 aaKnown RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 CFAP20Q9Y6A4 193 aaKnown RBP15.93■□□□□ 0.14
COL9A3-208ENST00000469802 RPS6KL1Q9Y6S9 549 aa15.93■□□□□ 0.14
COL9A3-208ENST00000469802 UBR5O95071 2799 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-208ENST00000469802 IGHV5-51A0A0C4DH38 117 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 GOLGA6L9A6NEM1 432 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 TLCD2A6NGC4 264 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 H7C0S8 307 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 NKX2-8O15522 239 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 SLC28A2O43868 658 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 METTL18O95568 372 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 FTCDO95954 541 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 ITGALP20701 1170 aa15.92■□□□□ 0.14
COL9A3-208ENST00000469802 OAS2P29728 719 aaKnown RBP15.92■□□□□ 0.14
COL9A3-208ENST00000469802 GDF10P55107 478 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms