RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 FASTKD1Q53R41 847 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 DUPD1Q68J44 220 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 MRNIPQ6NTE8 343 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 TMEM220Q6QAJ8 160 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 DET1Q7L5Y6 550 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 MAATS1Q7Z4T9 603 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 GALNT7Q86SF2 657 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLC9B2Q86UD5 537 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 PDZD3Q86UT5 571 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CNTN4Q8IWV2 1026 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CLDN19Q8N6F1 224 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 BEND7Q8N7W2 519 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 BBOF1Q8ND07 529 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 OR6P1Q8NGX9 317 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZNF669Q96BR6 464 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 RMDN2Q96LZ7 410 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 FCRL3Q96P31 734 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 TCF12Q99081 682 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 TTC1Q99614 292 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 EBNA1BP2Q99848 306 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 DPYSL5Q9BPU6 564 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 ERP44Q9BS26 406 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 CCM2Q9BSQ5 444 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 OR52A5Q9H2C5 316 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 STN1Q9H668 368 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 COG4Q9H9E3 785 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 EPB41L5Q9HCM4 733 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLC40A1Q9NP59 571 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 PRDM8Q9NQV8 689 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 INTS10Q9NVR2 710 aaKnown RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZNF624Q9P2J8 865 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 VPS9D1Q9Y2B5 631 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 WDR37Q9Y2I8 494 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 TEX264Q9Y6I9 313 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPS6KL1Q9Y6S9 549 aa8.13□□□□□ -1.11
TRAPPC3-206ENST00000469757 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLC5A10A0PJK1 596 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 TMEM8BA6NDV4 472 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 RHPN2P1A8MT19 583 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 PDZK1P1A8MUH7 402 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 EFCAB8A8MWE9 144 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CASC3O15234 703 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZW10O43264 779 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 DUX1O43812 170 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 OR1I1O60431 355 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CSO75390 466 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CPNE6O95741 557 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 MT-CO3P00414 261 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 POLBP06746 335 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLC35G4P0C7Q5 338 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 OR56A5P0C7T3 313 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SPINK2P20155 84 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CD1CP29017 333 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ATP5DP30049 168 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SLC19A1P41440 591 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 HALP42357 657 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CD151P48509 253 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 DRG2P55039 364 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ARL4CP56559 192 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 PLOD1Q02809 727 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZFP36L1Q07352 338 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 DHX9Q08211 1270 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 GBX1Q14549 363 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CLCA4Q14CN2 919 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 RTP5Q14D33 572 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 RPE65Q16518 533 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 LONRF1Q17RB8 773 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ISXQ2M1V0 245 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SPANXN3Q5MJ09 141 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZNF470Q6ECI4 717 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CAPRIN2Q6IMN6 1127 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CASC4Q6P4E1 433 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 WDR74Q6RFH5 385 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 TMEM26Q6ZUK4 368 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 CENPUQ71F23 418 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 TAS2R42Q7RTR8 314 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 PDIK1LQ8N165 341 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 LILRA3Q8N6C8 439 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 NAT14Q8WUY8 206 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 ZFPM2Q8WW38 1151 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 NXPE2Q96DL1 559 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 BIRC8Q96P09 236 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 GFM1Q96RP9 751 aaKnown RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 FAM167BQ9BTA0 163 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 FAM129AQ9BZQ8 928 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 TWSG1Q9GZX9 223 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 LRRN3Q9H3W5 708 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 KIR3DX1Q9H7L2 352 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 PDP2Q9P2J9 529 aa8.12□□□□□ -1.11
TRAPPC3-206ENST00000469757 GNPTGQ9UJJ9 305 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms