RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 OR4D9Q8NGE8 314 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 OR4L1Q8NH43 312 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 WDR36Q8NI36 951 aaKnown RBP9.54□□□□□ -0.88
SRRT-208ENST00000469602 CPT1BQ92523 772 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 SLCO2A1Q92959 643 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.54□□□□□ -0.88
SRRT-208ENST00000469602 TMEM159Q96B96 161 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 CXorf40BQ96DE9 158 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 AHCYL2Q96HN2 611 aaKnown RBP9.54□□□□□ -0.88
SRRT-208ENST00000469602 DPYSL5Q9BPU6 564 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 KIFC1Q9BW19 673 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
SRRT-208ENST00000469602 EPB41L1Q9H4G0 881 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 VPS37BQ9H9H4 285 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 MRM3Q9HC36 420 aaKnown RBP9.54□□□□□ -0.88
SRRT-208ENST00000469602 SLC40A1Q9NP59 571 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 TREX1Q9NSU2 369 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 PCYOX1Q9UHG3 505 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 ACSL5Q9ULC5 683 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 PCDHGA8Q9Y5G5 932 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 IGSF10Q6WRI0 2623 aa9.54□□□□□ -0.88
SRRT-208ENST00000469602 FAM208BQ5VWN6 2430 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 C17orf113A0A1B0GUU1 675 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PMS2P1A4D2B8 440 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PLD2O14939 933 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 AVILO75366 819 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 AP2A2O94973 939 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 GSTM1P09488 218 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 SLC35G4P0C7Q5 338 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 MLNP12872 115 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 NMBRP28336 390 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 RBMS1P29558 406 aaKnown RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 NSG1P42857 185 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PPM1FP49593 454 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 LIMK2P53671 638 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 GSTM4Q03013 218 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 TRA2AQ13595 282 aaKnown RBP eCLIP9.53□□□□□ -0.885e-11■■■■■ 35.1
SRRT-208ENST00000469602 GPR18Q14330 331 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 RPE65Q16518 533 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 ZNF658BQ4V348 819 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 FASTKD1Q53R41 847 aaKnown RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 AARS2Q5JTZ9 985 aaKnown RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 TMEM71Q6P5X7 295 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 XKR5Q6UX68 686 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 TMEM26Q6ZUK4 368 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 CFAP206Q8IYR0 622 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 MCUQ8NE86 351 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 HM13Q8TCT9 377 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PRR11Q96HE9 360 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 CCDC74BQ96LY2 380 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 ZNF578Q96N58 590 aaPredicted RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 SLC46A1Q96NT5 459 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 TTC1Q99614 292 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 TBC1D10AQ9BXI6 508 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 WWP1Q9H0M0 922 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 XAB2Q9HCS7 855 aaKnown RBP9.53□□□□□ -0.88
SRRT-208ENST00000469602 ASCL3Q9NQ33 180 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 RNF14Q9UBS8 474 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 FAM8A1Q9UBU6 413 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PSMD13Q9UNM6 376 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
SRRT-208ENST00000469602 MGAQ8IWI9 3026 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 PRAMEF33A0A0G2JMD5 474 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 SDR42E2A6NKP2 422 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 GOLGA8MH3BSY2 632 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 QSOX1O00391 747 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 HGSO14964 777 aaPredicted RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 CD3EAPO15446 510 aaKnown RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 TLX3O43711 291 aaPredicted RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 OR1I1O60431 355 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 UBXN7O94888 489 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 TNFSF15O95150 251 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 FTH1P02794 183 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 POLBP06746 335 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 ITGA2BP08514 1039 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 THRAP10827 490 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 MTHFD1P11586 935 aaKnown RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 HGFP14210 728 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 TYRP1P17643 537 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 MPSTP25325 297 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 PPARGP37231 505 aaPredicted RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 PAFAH1B1P43034 410 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 PTGIRP43119 386 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 MAPK9P45984 424 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 ERVPABLB-1P60509 514 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 PTK6Q13882 451 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 SEMA3AQ14563 771 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 C16orf72Q14CZ0 275 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 RNASEH2BQ5TBB1 312 aaKnown RBP9.52□□□□□ -0.89
SRRT-208ENST00000469602 CASC4Q6P4E1 433 aa9.52□□□□□ -0.89
SRRT-208ENST00000469602 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms