RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PTPN4P29074 926 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 SPAM1P38567 509 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 GPS2Q13227 327 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 OLIG2Q13516 323 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 LAMB3Q13751 1172 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 PLCL1Q15111 1095 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 PRKD1Q15139 912 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-204ENST00000469207 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 FNBP1LQ5T0N5 605 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 ATCAYQ86WG3 371 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 APLFQ8IW19 511 aaPredicted RBP11.98□□□□□ -0.49
HDAC3-204ENST00000469207 RBM12BQ8IXT5 1001 aaKnown RBP11.98□□□□□ -0.49
HDAC3-204ENST00000469207 ZNF567Q8N184 647 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 OR8K1Q8NGG5 319 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 BRSK1Q8TDC3 778 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 UBXN4Q92575 508 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 MR1Q95460 341 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 DEF6Q9H4E7 631 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 LRRC4CQ9HCJ2 640 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 LUZP4Q9P127 313 aa11.98□□□□□ -0.49
HDAC3-204ENST00000469207 FARSAQ9Y285 508 aaKnown RBP11.98□□□□□ -0.49
HDAC3-204ENST00000469207 LRRK2Q5S007 2527 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 GLYATL1P3A0A0U1RQE8 302 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 UBA6A0AVT1 1052 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 OR5K3A6NET4 321 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ZNF487B1APH4 448 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 SCRG1O75711 98 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 AGTP01019 485 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ZFXP17010 805 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 POLR2CP19387 275 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ARHGAP25P42331 645 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 CDKN2BP42772 138 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ARL4DP49703 201 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 KPNA2P52292 529 aaKnown RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 DMPKQ09013 629 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 XRCC4Q13426 336 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 SLC1A5Q15758 541 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 SLC14A2Q15849 920 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 PRR30Q53SZ7 412 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 LDLRAP1Q5SW96 308 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 METRNLQ641Q3 311 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 D2HGDHQ8N465 521 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 DDHD1Q8NEL9 900 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 IPMKQ8NFU5 416 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 OR4E2Q8NGC2 313 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 CPT1CQ8TCG5 803 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ZNF398Q8TD17 642 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 TFB1MQ8WVM0 346 aaKnown RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ZNF501Q96CX3 271 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ZNF514Q96K75 400 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 C12orf66Q96MD2 445 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 NHEJ1Q9H9Q4 299 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 KCND1Q9NSA2 647 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 TFR2Q9UP52 801 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC3-204ENST00000469207 ARL5AQ9Y689 179 aa11.97□□□□□ -0.49
HDAC3-204ENST00000469207 SPTBP11277 2137 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 SLC9B1P1A6NJY1 282 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 A6NL46 340 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 C21orf140B9A014 251 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 SGTAO43765 313 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 KCNJ13O60928 360 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 SEMA7AO75326 666 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 VPS4BO75351 444 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 RECKO95980 971 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 MTHFD1P11586 935 aaKnown RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 PTGIRP43119 386 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 RPS15P62841 145 aaKnown RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 HSD11B2P80365 405 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 ACY1Q03154 408 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 UGT8Q16880 541 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 LRRC38Q5VT99 294 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 CAPRIN2Q6IMN6 1127 aaKnown RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 DAAM2Q86T65 1068 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 VSIG1Q86XK7 387 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 TMEM126BQ8IUX1 230 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 CFAP206Q8IYR0 622 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 IQCDQ96DY2 449 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 FCRL5Q96RD9 977 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 SRPK1Q96SB4 655 aaKnown RBP11.96□□□□□ -0.49
HDAC3-204ENST00000469207 APOL2Q9BQE5 337 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 GORASP1Q9BQQ3 440 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 SLC25A23Q9BV35 468 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 TLR10Q9BXR5 811 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 GPR87Q9BY21 358 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 KLHL25Q9H0H3 589 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 ING2Q9H160 280 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 TRABDQ9H4I3 376 aa11.96□□□□□ -0.49
HDAC3-204ENST00000469207 FAM96AQ9H5X1 160 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms