RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ACSL5Q9ULC5 683 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 CDYLQ9Y232 598 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 PCYT1BQ9Y5K3 369 aaPredicted RBP11.08□□□□□ -0.64
MSH5-214ENST00000468602 SNX11Q9Y5W9 270 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 ARHGEF17Q96PE2 2063 aaPredicted RBP11.08□□□□□ -0.64
MSH5-214ENST00000468602 ATRXP46100 2492 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 RALGAPA1Q6GYQ0 2036 aa11.08□□□□□ -0.64
MSH5-214ENST00000468602 TPRP12270 2363 aaKnown RBP11.08□□□□□ -0.64
MSH5-214ENST00000468602 FAM95CA0A1B0GW59 222 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 LMO7DNF2Z398 122 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 KHNYNO15037 678 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 MTX2O75431 263 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 POP7O75817 140 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 KRT37O76014 449 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 ASMTLO95671 621 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SHBGP04278 402 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SNRPAP09012 282 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 CRABP2P29373 138 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CCR7P32248 378 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CASP8Q14790 479 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 ELOCQ15369 112 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 HECTD2Q5U5R9 776 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CAPN12Q6ZSI9 719 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SH2D5Q6ZV89 423 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 MICALCLQ6ZW33 695 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CD200R1Q8TD46 325 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SAP25Q8TEE9 199 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 ZFPM2Q8WW38 1151 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 ASZ1Q8WWH4 475 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 TSPAN17Q96FV3 270 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 PGM2Q96G03 612 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 LRRC61Q9BV99 259 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 GSDMCQ9BYG8 508 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SLC13A1Q9BZW2 595 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CCDC68Q9H2F9 335 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 ARRDC1-AS1Q9H2J1 176 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 CYP4F12Q9HCS2 524 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 SPASTQ9UBP0 616 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 CRYL1Q9Y2S2 319 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 MTO1Q9Y2Z2 717 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 ST14Q9Y5Y6 855 aa11.07□□□□□ -0.64
MSH5-214ENST00000468602 EP300Q09472 2414 aaPredicted RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
MSH5-214ENST00000468602 DMDP11532 3685 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 UQCRHLA0A096LP55 91 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 IQANK1A0A1B0GTG1 560 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 OR2AG2A6NM03 316 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 OR5K4A6NMS3 321 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 RASGRF2O14827 1237 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 SCAMP1O15126 338 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 VPS26AO75436 327 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 TSPAN12O95859 305 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 UQCRHP07919 91 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 GIMD1P0DJR0 217 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 MPC1LP0DKB6 136 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 COL6A2P12110 1019 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 ZNF37AP17032 561 aaPredicted RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 JUNDP17535 347 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 FMO4P31512 558 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 TAS2R39P59534 338 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 IRX4P78413 519 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 CTBSQ01459 385 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.644e-7■□□□□ 10.4
MSH5-214ENST00000468602 EFTUD2Q15029 972 aaKnown RBP eCLIP11.06□□□□□ -0.646e-16■■■■■ 87.5
MSH5-214ENST00000468602 HLA-BQ31612 363 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 RBM20Q5T481 1227 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 ZNF648Q5T619 568 aaPredicted RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 PTRHD1Q6GMV3 140 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 CAPRIN2Q6IMN6 1127 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 HDXQ7Z353 690 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 TRAPPC5Q8IUR0 188 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 OTUD6BQ8N6M0 293 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 FAM181AQ8N9Y4 354 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 AVL9Q8NBF6 648 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 TSACCQ96A04 125 aaPredicted RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 CABS1Q96KC9 395 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 TWSG1Q9GZX9 223 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 OR52A5Q9H2C5 316 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 COG4Q9H9E3 785 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 SYTL2Q9HCH5 934 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 MRPL40Q9NQ50 206 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 MKS1Q9NXB0 559 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 SLC23A2Q9UGH3 650 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
MSH5-214ENST00000468602 PLAAQ9Y263 795 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 IKBKGQ9Y6K9 419 aa11.06□□□□□ -0.64
MSH5-214ENST00000468602 TMEM131Q92545 1883 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms