RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ASB8Q9H765 288 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 UCK1Q9HA47 277 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 NLE1Q9NVX2 485 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-205ENST00000468338 PAK5Q9P286 719 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 ZNF624Q9P2J8 865 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-205ENST00000468338 CPNE7Q9UBL6 633 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 ZFHX4Q86UP3 3567 aa10.96□□□□□ -0.65
COL4A6-205ENST00000468338 CHD6Q8TD26 2715 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 ZFYVE26Q68DK2 2539 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CFAP47Q6ZTR5 3102 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 TRBV23OR9-2A0A075B6M9 112 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 PMS2P1A4D2B8 440 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 PLD2O14939 933 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CEP104O60308 925 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 POP7O75817 140 aaKnown RBP10.95□□□□□ -0.66
COL4A6-205ENST00000468338 TPH1P17752 444 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CXCR5P32302 372 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CSF2RBP32927 897 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 RPL22P35268 128 aaKnown RBP10.95□□□□□ -0.66
COL4A6-205ENST00000468338 LIMK2P53671 638 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CDH17Q12864 832 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 GTF2H3Q13889 308 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 LONRF2Q1L5Z9 754 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 INSCQ1MX18 579 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 GPR33Q49SQ1 333 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 C3orf38Q5JPI3 329 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 TMEM220Q6QAJ8 160 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 XKR5Q6UX68 686 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 C4orf22Q6V702 233 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 USP53Q70EK8 1073 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 RAB11FIP2Q7L804 512 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 SNX20Q7Z614 316 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 SLC9B2Q86UD5 537 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 AMZ2Q86W34 360 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 TRAPPC5Q8IUR0 188 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 NXPE1Q8N323 547 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 OR4D9Q8NGE8 314 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 OR52K1Q8NGK4 314 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 GDAP1Q8TB36 358 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 UBXN4Q92575 508 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 SH3KBP1Q96B97 665 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CDKN2AIPNLQ96HQ2 116 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 PBKQ96KB5 322 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 DNAJC1Q96KC8 554 aaKnown RBP10.95□□□□□ -0.66
COL4A6-205ENST00000468338 TTC25Q96NG3 672 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 SLC38A3Q99624 504 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 DPYSL5Q9BPU6 564 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 STRADBQ9C0K7 418 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 SEMA6CQ9H3T2 930 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 RDH14Q9HBH5 336 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 CASS4Q9NQ75 786 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 EIF2B3Q9NR50 452 aaKnown RBP10.95□□□□□ -0.66
COL4A6-205ENST00000468338 HOMER3Q9NSC5 361 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 ACSL6Q9UKU0 697 aa10.95□□□□□ -0.66
COL4A6-205ENST00000468338 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
COL4A6-205ENST00000468338 IGHV5-10-1A0A0J9YXX1 117 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 KLHL33A6NCF5 533 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 LILRA5A6NI73 299 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 CCL22O00626 93 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 HGSO14964 777 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-205ENST00000468338 SNX2O60749 519 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ITGA2BP08514 1039 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ZSCAN5DPP0CG00 497 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 THRAP10827 490 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ITGALP20701 1170 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 IDSP22304 550 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 GRIA1P42261 906 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 KCNJ1P48048 391 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 IDH3AP50213 366 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ARSDP51689 593 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ACVR1Q04771 509 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 TRA2AQ13595 282 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL4A6-205ENST00000468338 POU6F1Q14863 301 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 CLCA4Q14CN2 919 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 CYP1B1Q16678 543 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 AMZ1Q400G9 498 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 BCL7AQ4VC05 210 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 METRNLQ641Q3 311 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 TMEM71Q6P5X7 295 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 WDR74Q6RFH5 385 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-205ENST00000468338 TMEM26Q6ZUK4 368 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 TAB3Q8N5C8 712 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-205ENST00000468338 CCDC89Q8N998 374 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 PEX13Q92968 403 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 ULK4Q96C45 1275 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 SGF29Q96ES7 293 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-205ENST00000468338 B3GNT4Q9C0J1 378 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 TGIF2Q9GZN2 237 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 EPB41L1Q9H4G0 881 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 SYNDIG1Q9H7V2 258 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 THSD1Q9NS62 852 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 KCNK4Q9NYG8 393 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 WDR37Q9Y2I8 494 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 PCDHGA7Q9Y5G6 932 aa10.94□□□□□ -0.66
COL4A6-205ENST00000468338 MGAT4DA6NG13 374 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms