RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 SLC29A3Q9BZD2 475 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 IL26Q9NPH9 171 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 PCMTD2Q9NV79 361 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 HAUS2Q9NVX0 235 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 SLC5A6Q9Y289 635 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 DNMT3AQ9Y6K1 912 aaPredicted RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 H3BMH7 237 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 MTHFD1P11586 935 aaKnown RBP11.89□□□□□ -0.51
UBR4-211ENST00000467272 SKILP12757 684 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 KPNA2P52292 529 aaKnown RBP11.89□□□□□ -0.51
UBR4-211ENST00000467272 SOX8P57073 446 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 CDK18Q07002 472 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 KLHL30Q0D2K2 578 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 NR6A1Q15406 480 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 METRNLQ641Q3 311 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 BRSK1Q8TDC3 778 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 MR1Q95460 341 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 OLFM3Q96PB7 478 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 SLC25A51Q9H1U9 297 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 SLAMF7Q9NQ25 335 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 TRIM10Q9UDY6 481 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 ANAPC7Q9UJX3 599 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
UBR4-211ENST00000467272 F8P00451 2351 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 C3orf70A6NLC5 250 aaPredicted RBP11.88□□□□□ -0.51
UBR4-211ENST00000467272 ZNF487B1APH4 448 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 POP7O75817 140 aaKnown RBP11.88□□□□□ -0.51
UBR4-211ENST00000467272 PRF1P14222 555 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 VCLP18206 1134 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 TAS2R40P59535 323 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 PDE1BQ01064 536 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 ZRANB3Q5FWF4 1079 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 DNTTIP2Q5QJE6 756 aaKnown RBP11.88□□□□□ -0.51
UBR4-211ENST00000467272 SPOCD1Q6ZMY3 1216 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 AMZ2Q86W34 360 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 TMEM126BQ8IUX1 230 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 SLC34A3Q8N130 599 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 RNF157Q96PX1 679 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 SRPK1Q96SB4 655 aaKnown RBP11.88□□□□□ -0.51
UBR4-211ENST00000467272 INSM2Q96T92 566 aaPredicted RBP11.88□□□□□ -0.51
UBR4-211ENST00000467272 PITPNM3Q9BZ71 974 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 KIR3DX1Q9H7L2 352 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 ANO10Q9NW15 660 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 SMOXQ9NWM0 555 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 HRASLS2Q9NWW9 162 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 GPR83Q9NYM4 423 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 CHMP5Q9NZZ3 219 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 SLC24A2Q9UI40 661 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 B3GNT3Q9Y2A9 372 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 NTNG1Q9Y2I2 539 aa11.88□□□□□ -0.51
UBR4-211ENST00000467272 A0A1B0GTH6 734 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 LOC285095A0A1B0GVY8 99 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 MYO1FO00160 1098 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 ZNF185O15231 689 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 SGTAO43765 313 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 PROSCO94903 275 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 LCA5LO95447 670 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 NDST3O95803 873 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
UBR4-211ENST00000467272 HALP42357 657 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 ATP1A4Q13733 1029 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 NFE2L1Q14494 772 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 NCF4Q15080 339 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 ZNF658BQ4V348 819 aaPredicted RBP11.87□□□□□ -0.51
UBR4-211ENST00000467272 VWA5B1Q5TIE3 1220 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 SLC9A4Q6AI14 798 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 NT5DC3Q86UY8 548 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 VSIG1Q86XK7 387 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 TRAPPC5Q8IUR0 188 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 IQCKQ8N0W5 287 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 OR1L3Q8NH93 324 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 CPT1BQ92523 772 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 RAPGEF5Q92565 580 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 SYN2Q92777 582 aaPredicted RBP11.87□□□□□ -0.51
UBR4-211ENST00000467272 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 POMT2Q9UKY4 750 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 SNX7Q9UNH6 387 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
UBR4-211ENST00000467272 SEC16AO15027 2179 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 A0A087X0T9 212 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 UBA6A0AVT1 1052 aaPredicted RBP11.86□□□□□ -0.51
UBR4-211ENST00000467272 ANKUB1A6NFN9 424 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 GPR39O43194 453 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 MT-CYBP00156 380 aaPredicted RBP11.86□□□□□ -0.51
UBR4-211ENST00000467272 KLK3P07288 261 aaPredicted RBP11.86□□□□□ -0.51
UBR4-211ENST00000467272 FAM228BP0C875 321 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 ELAVL4P26378 380 aaKnown RBP11.86□□□□□ -0.51
UBR4-211ENST00000467272 RRADP55042 308 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 PLCL1Q15111 1095 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 STX1AQ16623 288 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
UBR4-211ENST00000467272 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 KDELC1Q6UW63 502 aa11.86□□□□□ -0.51
UBR4-211ENST00000467272 Q6ZS92 163 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms