RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 C1orf189Q5VU69 101 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 FBXW10Q5XX13 1052 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 TMEM211Q6ICI0 200 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 NLRP8Q86W28 1048 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 CCDC110Q8TBZ0 833 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 AP1M1Q9BXS5 423 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 CARD9Q9H257 536 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 HRASLS2Q9NWW9 162 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 PTGFRNQ9P2B2 879 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 CDYLQ9Y232 598 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 RNF6Q9Y252 685 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 OR5K3A6NET4 321 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 NPIPA5E9PKD4 350 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 KLRC4O43908 158 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 NUAK1O60285 661 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 LRIG2O94898 1065 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 PRAMEF1O95521 474 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 GNA15P30679 374 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 SCNN1BP51168 640 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 CTSCP53634 463 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 ALDH6A1Q02252 535 aaKnown RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 PARP15Q460N3 678 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 AGAP9Q5VTM2 703 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 ABRAXAS1Q6UWZ7 409 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 RFLNAQ6ZTI6 216 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 USP45Q70EL2 814 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 RRAGAQ7L523 313 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 TSPAN33Q86UF1 283 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 OOSP2Q86WS3 158 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 GPR135Q8IZ08 494 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 Q96MF0 132 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 CINPQ9BW66 212 aaPredicted RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 TSPAN10Q9H1Z9 355 aaPredicted RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 NOL6Q9H6R4 1146 aaKnown RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 NPIPA1Q9UND3 350 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 DNAJC16Q9Y2G8 782 aa12.21□□□□□ -0.45
UBR4-210ENST00000466969 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.45
UBR4-210ENST00000466969 NPIPB15A6NHN6 443 aaPredicted RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 PALMO75781 387 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 USP1O94782 785 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 ERBB2P04626 1255 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 BMP7P18075 431 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 EPHB1P54762 984 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 OLIG2Q13516 323 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 SLC39A14Q15043 492 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 FBXO38Q6PIJ6 1188 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 KIRREL2Q6UWL6 708 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 ARSKQ6UWY0 536 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 ZDHHC17Q8IUH5 632 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 C1orf131Q8NDD1 294 aaKnown RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 PROKR1Q8TCW9 393 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 ZFPM2Q8WW38 1151 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 RND1Q92730 232 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 HDAC10Q969S8 669 aa12.2□□□□□ -0.46
UBR4-210ENST00000466969 RIOK2Q9BVS4 552 aaKnown RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 GTPBP4Q9BZE4 634 aaKnown RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 MORC2Q9Y6X9 1032 aaPredicted RBP12.2□□□□□ -0.46
UBR4-210ENST00000466969 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 A6NNC1 897 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 FAM72CH0Y354 149 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 CDH3P22223 829 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 HALP42357 657 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 KIR2DL3P43628 341 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 DRG2P55039 364 aaKnown RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 AP1S1P61966 158 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 NSUN2Q08J23 767 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBR4-210ENST00000466969 FAM72AQ5TYM5 149 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 FAM72DQ6L9T8 149 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 BHLHB9Q6PI77 547 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 PAQR7Q86WK9 346 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 FAM72BQ86X60 149 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 PASD1Q8IV76 773 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 WDTC1Q8N5D0 677 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 RTL3Q8N8U3 475 aaKnown RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 N4BP2L2Q92802 583 aaPredicted RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 SCRN2Q96FV2 425 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 CATSPERBQ9H7T0 1116 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 MRM3Q9HC36 420 aaKnown RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
UBR4-210ENST00000466969 TRIM10Q9UDY6 481 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 NEU3Q9UQ49 428 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 HS3ST3B1Q9Y662 390 aa12.19□□□□□ -0.46
UBR4-210ENST00000466969 WASH4PA8MWX3 477 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 J3KR12 359 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 CETN3O15182 167 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 ZNHIT1O43257 154 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 ASNA1O43681 348 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 SOCS5O75159 536 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 ZNF8P17098 575 aaPredicted RBP12.18□□□□□ -0.46
UBR4-210ENST00000466969 KPNA2P52292 529 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms