RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ANXA9O76027 345 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 SEPT6Q14141 434 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 SPA17Q15506 151 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.74■□□□□ 0.59
COL9A3-206ENST00000466532 ITPRIPL1Q6GPH6 555 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 SIDT2Q8NBJ9 832 aaKnown RBP18.74■□□□□ 0.59
COL9A3-206ENST00000466532 UBXN4Q92575 508 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 ABHD17AQ96GS6 310 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 GORASP1Q9BQQ3 440 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 EPN3Q9H201 632 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 PDE7BQ9NP56 450 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 RARRES3Q9UL19 164 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 KCTD3Q9Y597 815 aa18.74■□□□□ 0.59
COL9A3-206ENST00000466532 CFAP20Q9Y6A4 193 aaKnown RBP18.74■□□□□ 0.59
COL9A3-206ENST00000466532 TNRC6AQ8NDV7 1962 aaKnown RBP18.73■□□□□ 0.59
COL9A3-206ENST00000466532 C2orf81A6NN90 581 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 KATNA1O75449 491 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 TIAF1O95411 115 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 MT-ND3P03897 115 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 MTHFD1P11586 935 aaKnown RBP18.73■□□□□ 0.59
COL9A3-206ENST00000466532 LPOP22079 712 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-206ENST00000466532 TUBB3Q13509 450 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 ERV3-1Q14264 604 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 KCNAB1Q14722 419 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 TAF1AQ15573 450 aaPredicted RBP18.73■□□□□ 0.59
COL9A3-206ENST00000466532 METRNLQ641Q3 311 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 CCDC170Q8IYT3 715 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 SLC41A2Q96JW4 573 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 MAP3K3Q99759 626 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 FERMT1Q9BQL6 677 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 TRIM5Q9C035 493 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 WWP1Q9H0M0 922 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 ASB8Q9H765 288 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 LUC7LQ9NQ29 371 aaKnown RBP18.73■□□□□ 0.59
COL9A3-206ENST00000466532 SEMA5BQ9P283 1151 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 ANAPC2Q9UJX6 822 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 KCND3Q9UK17 655 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 PADI1Q9ULC6 663 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 KCNMB2Q9Y691 235 aa18.73■□□□□ 0.59
COL9A3-206ENST00000466532 MACROD2A1Z1Q3 448 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 MGAT4DA6NG13 374 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 FOLR1P15328 257 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 CYLC1P35663 651 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 ARL4DP49703 201 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 COPS2P61201 443 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 OTUD4Q01804 1114 aaKnown RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 LACTB2Q53H82 288 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 DNTTIP2Q5QJE6 756 aaKnown RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 DUS1LQ6P1R4 473 aaKnown RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 ACTL9Q8TC94 416 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 NAT14Q8WUY8 206 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 C12orf66Q96MD2 445 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 INSM2Q96T92 566 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-206ENST00000466532 APOL2Q9BQE5 337 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 FAM8A1Q9UBU6 413 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 FKBPLQ9UIM3 349 aa18.72■□□□□ 0.59
COL9A3-206ENST00000466532 OR5K3A6NET4 321 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 C5orf60A6NFR6 353 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 TLCD2A6NGC4 264 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 SRP72O76094 671 aaKnown RBP18.71■□□□□ 0.59
COL9A3-206ENST00000466532 FURINP09958 794 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 EBLN1P0CF75 366 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 PSMB4P28070 264 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 CTNNA1P35221 906 aaKnown RBP18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ADRA1AP35348 466 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 CASRP41180 1078 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ACY1Q03154 408 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 OLIG2Q13516 323 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 DNASE1L3Q13609 305 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ANKRD20A2Q5SQ80 823 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ANKRD20A1Q5TYW2 823 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ANKRD20A3Q5VUR7 823 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 SARM1Q6SZW1 724 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 RANBP10Q6VN20 620 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 OOSP2Q86WS3 158 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 KMT5CQ86Y97 462 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 CDKL3Q8IVW4 592 aaPredicted RBP18.71■□□□□ 0.59
COL9A3-206ENST00000466532 OR2L2Q8NH16 312 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 CT55Q8WUE5 264 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 CD180Q99467 661 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 LHX9Q9NQ69 397 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 HRASLS2Q9NWW9 162 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 ACSL5Q9ULC5 683 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 POLHQ9Y253 713 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 AAR2Q9Y312 384 aaKnown RBP18.71■□□□□ 0.59
COL9A3-206ENST00000466532 SPTBP11277 2137 aa18.71■□□□□ 0.59
COL9A3-206ENST00000466532 HECTD1Q9ULT8 2610 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 UBA6A0AVT1 1052 aaPredicted RBP18.7■□□□□ 0.58
COL9A3-206ENST00000466532 CDC14CA4D256 554 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 KLHL33A6NCF5 533 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 CREG1O75629 220 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 STK10O94804 968 aaKnown RBP18.7■□□□□ 0.58
COL9A3-206ENST00000466532 SLC35G4P0C7Q5 338 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 RBP3P10745 1247 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 CTNNA2P26232 953 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 EIF3EP60228 445 aaKnown RBP18.7■□□□□ 0.58
COL9A3-206ENST00000466532 PRPSAP1Q14558 356 aa18.7■□□□□ 0.58
COL9A3-206ENST00000466532 BCL7AQ4VC05 210 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms