RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 THAP12O43422 761 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SMAD6O43541 496 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 SNAP91O60641 907 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 TMEM63AO94886 807 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 RHOBTB3O94955 611 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 POP4O95707 220 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 IGHEP01854 428 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 HLA-DRAP01903 254 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 PCCBP05166 539 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 HOXC4P09017 264 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 CCR1P32246 355 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SMSP52788 366 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 CASP6P55212 293 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 RAD51Q06609 339 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 ELP6Q0PNE2 266 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 USP10Q14694 798 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 POLD3Q15054 466 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 PRKD1Q15139 912 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 WSCD2Q2TBF2 565 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 YOD1Q5VVQ6 348 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 FBXL22Q6P050 247 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 FOXR2Q6PJQ5 311 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 IGFL3Q6UXB1 125 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 CCDC73Q6ZRK6 1079 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 BEND5Q7L4P6 421 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SETD3Q86TU7 594 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 PPP1R3BQ86XI6 285 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 PLXDC1Q8IUK5 500 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SFTPA2Q8IWL1 248 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 REXO1L1PQ8IX06 675 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 C12orf56Q8IXR9 622 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SLC4A11Q8NBS3 891 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 CT55Q8WUE5 264 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 NINJ1Q92982 152 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SH3KBP1Q96B97 665 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 FAM149B1Q96BN6 582 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 NEIL1Q96FI4 390 aaPredicted RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 PRMT1Q99873 361 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 BRD8Q9H0E9 1235 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 CXXC4Q9H2H0 198 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 IPPKQ9H8X2 491 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 SPATS2LQ9NUQ6 558 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 TRNAU1APQ9NX07 287 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 XPO7Q9UIA9 1087 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 TSPAN16Q9UKR8 245 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 KIAA1257Q9ULG3 409 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 FARSAQ9Y285 508 aaKnown RBP5.79□□□□□ -1.48
NCL-208ENST00000466274 SDK2Q58EX2 2172 aa5.79□□□□□ -1.48
NCL-208ENST00000466274 ESYT3A0FGR9 886 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 GOLGA6L3A6NEY3 463 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 RNF103O00237 685 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 TULP2O00295 520 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 PPM1DO15297 605 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 SPAG6O75602 509 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ANKRD34CP0C6C1 535 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 SERPINH1P50454 418 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 RAD23BP54727 409 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 GEMIN4P57678 1058 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 ANAPC15P60006 121 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 SNRPD1P62314 119 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 FOLH1Q04609 750 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 FOXE3Q13461 319 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 KYNUQ16719 465 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 NRN1LQ496H8 165 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ANKRD40Q6AI12 368 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ERAP2Q6P179 960 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ZNF783Q6ZMS7 281 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 TAC4Q86UU9 113 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 NELFCDQ8IXH7 590 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 FAM186BQ8IYM0 893 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 CCL4L1Q8NHW4 92 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 FAR1Q8WVX9 515 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ISG20Q96AZ6 181 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 MTFMTQ96DP5 389 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 HSFY1Q96LI6 401 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 FCRL4Q96PJ5 515 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 TRAPPC9Q96Q05 1148 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 OR6C1Q96RD1 312 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 ZFYVE21Q9BQ24 234 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 WRAP53Q9BUR4 548 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 APOBEC3GQ9HC16 384 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 FGF22Q9HCT0 170 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 PDE7BQ9NP56 450 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 CISHQ9NSE2 258 aa5.78□□□□□ -1.48
NCL-208ENST00000466274 RPH3AQ9Y2J0 694 aaPredicted RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 PRRC2CQ9Y520 2896 aaKnown RBP5.78□□□□□ -1.48
NCL-208ENST00000466274 MYH10P35580 1976 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 TRGV8A0A0C4DH27 118 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 CXorf51AA0A1B0GTR3 108 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.77□□□□□ -1.49
NCL-208ENST00000466274 PRSS38A1L453 326 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 TMEM202A6NGA9 273 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 FAM47E-STBD1D6RA91 191 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 MASP2O00187 686 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 CCL21O00585 134 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 E2F3O00716 465 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 TOX3O15405 576 aaPredicted RBP5.77□□□□□ -1.49
NCL-208ENST00000466274 JRKO75564 520 aa5.77□□□□□ -1.49
NCL-208ENST00000466274 ADCY5O95622 1261 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms