RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 VCX3BQ9H321 246 aa18.36■□□□□ 0.53
CAPN3-209ENST00000466222 ZFR2Q9UPR6 939 aaKnown RBP18.36■□□□□ 0.53
CAPN3-209ENST00000466222 DPPA5A6NC42 116 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 INPP4BO15327 924 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 TRIM13O60858 407 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 NIPSNAP2O75323 286 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 HSPA4LO95757 839 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 SOD1P00441 154 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 STMN1P16949 149 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 CRABP2P29373 138 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 RAB10P61026 200 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 FGL2Q14314 439 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 CFAP157Q5JU67 520 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 EPGNQ6UW88 154 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 PLA2G15Q8NCC3 412 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 ANKRD49Q8WVL7 239 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 AARSD1Q9BTE6 412 aaKnown RBP18.35■□□□□ 0.53
CAPN3-209ENST00000466222 CCDC28BQ9BUN5 200 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 P2RY12Q9H244 342 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 EBF1Q9UH73 591 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 ITGB6P18564 788 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 PTGER3P43115 390 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 POLD2P49005 469 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 SUOXP51687 545 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 ADPRHP54922 357 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 POU4F1Q01851 419 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 DLG1Q12959 904 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 GPR33Q49SQ1 333 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 AARS2Q5JTZ9 985 aaKnown RBP18.35■□□□□ 0.53
CAPN3-209ENST00000466222 GPRC6AQ5T6X5 926 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 NAPRTQ6XQN6 538 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 DET1Q7L5Y6 550 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 TRIM74Q86UV6 250 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 GJD3Q8N144 294 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 KCTD4Q8WVF5 259 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 CLPTM1LQ96KA5 538 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 TBC1D17Q9HA65 648 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 S100A14Q9HCY8 104 aa18.35■□□□□ 0.53
CAPN3-209ENST00000466222 G3V2L1 256 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 PSMD11O00231 422 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 SLC22A2O15244 555 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 PAK4O96013 591 aaPredicted RBP18.34■□□□□ 0.53
CAPN3-209ENST00000466222 ACADMP11310 421 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 MAT2AP31153 395 aaKnown RBP18.34■□□□□ 0.53
CAPN3-209ENST00000466222 ACSL1P33121 698 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 PTPN5P54829 565 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 DCDC1P59894 354 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 CERS6Q6ZMG9 384 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 CENPLQ8N0S6 344 aaPredicted RBP18.34■□□□□ 0.53
CAPN3-209ENST00000466222 LKAAEAR1Q8TD35 194 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 FAM131CQ96AQ9 280 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 NUS1Q96E22 293 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 TSNARE1Q96NA8 513 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 HHIPQ96QV1 700 aa18.34■□□□□ 0.53
CAPN3-209ENST00000466222 PLRG1O43660 514 aaKnown RBP18.33■□□□□ 0.53
CAPN3-209ENST00000466222 AP1G1O43747 822 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 PKMP14618 531 aaKnown RBP18.33■□□□□ 0.53
CAPN3-209ENST00000466222 PXNP49023 591 aaPredicted RBP18.33■□□□□ 0.53
CAPN3-209ENST00000466222 TPMTP51580 245 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 SLC12A2P55011 1212 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 ZNF284Q2VY69 593 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 ZDHHC20Q5W0Z9 365 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 PGBD3Q8N328 593 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 TRAM1L1Q8N609 369 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 FRMD1Q8N878 549 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 GATA6Q92908 595 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.53
CAPN3-209ENST00000466222 C1QTNF1Q9BXJ1 281 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 NMRAL1Q9HBL8 299 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 MBNL1Q9NR56 388 aaKnown RBP18.33■□□□□ 0.53
CAPN3-209ENST00000466222 PDP2Q9P2J9 529 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 TLK1Q9UKI8 766 aa18.33■□□□□ 0.53
CAPN3-209ENST00000466222 TBC1D3DA0A087WVF3 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3IA0A087WXS9 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3EA0A087X179 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3KA0A087X1G2 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3FA6NER0 549 aaPredicted RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 MEI4A8MW99 385 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3LB9A6J9 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 PRMT5O14744 637 aaPredicted RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TSPAN6O43657 245 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 RHOBTB1O94844 696 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 DCNP07585 359 aaKnown RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3HP0C7X1 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 COL6A2P12110 1019 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 FDXRP22570 491 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 GLRBP48167 497 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 PPP2CBP62714 309 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 PPP2CAP67775 309 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 IRX1P78414 480 aaPredicted RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 SLC25A3Q00325 362 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3GQ6DHY5 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3CQ6IPX1 549 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 FAM45BPQ6NSW5 357 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 SYT13Q7L8C5 426 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 TBC1D3Q8IZP1 549 aaPredicted RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 RBFAQ8N0V3 343 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 SIDT2Q8NBJ9 832 aaKnown RBP18.33■□□□□ 0.52
CAPN3-209ENST00000466222 FAM45AQ8TCE6 357 aa18.33■□□□□ 0.52
CAPN3-209ENST00000466222 NXNL1Q96CM4 212 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms