RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-211	ENST00000466054	GAGE5	Q13069	117 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	GAGE6	Q13070	117 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	UBE2V1	Q13404	147 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	GRAP	Q13588	217 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	GARNL3	Q5VVW2	1013 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	OR7E24	Q6IFN5	339 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	HAUS6	Q7Z4H7	955 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	AACS	Q86V21	672 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	CTAGE4	Q8IX94	777 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	SCML4	Q8N228	414 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	GUF1	Q8N442	669 aa	Known RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	MINDY1	Q8N5J2	469 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	CCDC89	Q8N998	374 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	SYT2	Q8N9I0	419 aa	Predicted RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	POC1A	Q8NBT0	407 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	SNRNP27	Q8WVK2	155 aa	Known RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	ABHD8	Q96I13	439 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	LRRC1	Q9BTT6	524 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	MMP27	Q9H306	513 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	KCNK15	Q9H427	330 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	TCF7L2	Q9NQB0	619 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	NKIRAS2	Q9NYR9	191 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	KLHL9	Q9P2J3	617 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	LARS	Q9P2J5	1176 aa	Known RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	B3GALT5	Q9Y2C3	310 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	WBP11	Q9Y2W2	641 aa	Known RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	ASTN2	O75129	1339 aa	Predicted RBP	4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054	ZNF541	Q9H0D2	1346 aa		4.1	□□□□□ -1.75
LRCH3-211	ENST00000466054		A8MV72	311 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	TMEM178B	H3BS89	294 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	SH2B2	O14492	632 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	FIBP	O43427	364 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	PDE9A	O76083	593 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	F7	P08709	466 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	VPREB1	P12018	145 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	AKR1B1	P15121	316 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	NMBR	P28336	390 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	ARCN1	P48444	511 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	ZNF132	P52740	706 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	SNRPE	P62304	92 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	IFI35	P80217	286 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	PPP2R2B	Q00005	443 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	CALD1	Q05682	793 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	BECN1	Q14457	450 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	TOMM20	Q15388	145 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	ACCSL	Q4AC99	568 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	FAM98B	Q52LJ0	330 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	GPR139	Q6DWJ6	353 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	FOXL2NB	Q6ZUU3	175 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	KRT74	Q7RTS7	529 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	LDB1	Q86U70	411 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	LINC00346	Q8IVM7	164 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	METTL27	Q8N6F8	245 aa	Predicted RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	APPL2	Q8NEU8	664 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	OR52I2	Q8NH67	350 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	TBC1D16	Q8TBP0	767 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	SMPDL3B	Q92485	455 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	PKP4	Q99569	1192 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	PPIL3	Q9H2H8	161 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	ANKEF1	Q9NU02	776 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	ABCF3	Q9NUQ8	709 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	TAS2R14	Q9NYV8	317 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	CPSF2	Q9P2I0	782 aa	Known RBP	4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	HACL1	Q9UJ83	578 aa		4.09	□□□□□ -1.75
LRCH3-211	ENST00000466054	GPR75-ASB3	A0A0A6YYF3	556 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054		A6NL46	340 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	MAGEB17	A8MXT2	336 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054		H0YIN7	160 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	BUB3	O43684	328 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	SYNGR3	O43761	229 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	PRAMEF11	O60813	436 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	LDLR	P01130	860 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	IL11	P20809	199 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	HOXA1	P49639	335 aa	Predicted RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	CD81	P60033	236 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	ZRSR1	Q15695	479 aa	Known RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	KRTAP24-1	Q3LI83	254 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	ZNF672	Q499Z4	452 aa	Predicted RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	MFSD4B	Q5TF39	518 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	FAM171B	Q6P995	826 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	TMCO3	Q6UWJ1	677 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	MAB21L3	Q8N8X9	362 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	PAPD5	Q8NDF8	572 aa	Known RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	CD101	Q93033	1021 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	LINGO1	Q96FE5	620 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	NEK1	Q96PY6	1258 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	LRRC4	Q9HBW1	653 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	SLC35C2	Q9NQQ7	365 aa		4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054	PPIE	Q9UNP9	301 aa	Known RBP	4.08	□□□□□ -1.76
LRCH3-211	ENST00000466054		A0A0G2JNG1	304 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	C16orf97	H3BN30	126 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	PLK4	O00444	970 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	ADAM20	O43506	726 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	WISP2	O76076	250 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	BMP10	O95393	424 aa		4.07	□□□□□ -1.76
LRCH3-211	ENST00000466054	CSF2RA	P15509	400 aa		4.07	□□□□□ -1.76

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