RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TFAP4Q01664 338 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 SP3Q02447 781 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 LRMPQ12912 555 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 RRS1Q15050 365 aaKnown RBP4.39□□□□□ -1.71
SMC4-205ENST00000465563 DOK6Q6PKX4 331 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 Q6ZSR9 355 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 SLC16A9Q7RTY1 509 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 GFI1Q99684 422 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 PKP2Q99959 881 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 SLC7A7Q9UM01 511 aa4.39□□□□□ -1.71
SMC4-205ENST00000465563 H3BQ06 376 aaPredicted RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 J3QR06 171 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 SMAD9O15198 467 aaKnown RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 HCRTR2O43614 444 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 NDUFS3O75489 264 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 TRIM49P0CI25 452 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 TRIM49CP0CI26 452 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 SELLP14151 372 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 CBLP22681 906 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 GATA2P23769 480 aaPredicted RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 SHC1P29353 583 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 MAPK9P45984 424 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 CDH11P55287 796 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 CEBPZQ03701 1054 aaKnown RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 BIRC3Q13489 604 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 ENPP2Q13822 863 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 TEAD2Q15562 447 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 TPRG1Q6ZUI0 275 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 ZNF843Q8N446 348 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 L3MBTL4Q8NA19 623 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 GSDMBQ8TAX9 411 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 WASH6PQ9NQA3 447 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 OLFML3Q9NRN5 406 aa4.38□□□□□ -1.71
SMC4-205ENST00000465563 TRMT1Q9NXH9 659 aaKnown RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 DBNLQ9UJU6 430 aaKnown RBP4.38□□□□□ -1.71
SMC4-205ENST00000465563 ARHGEF40Q8TER5 1519 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 A0A1W2PQF6 199 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 PLEKHD1A6NEE1 506 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 NPIPB15A6NHN6 443 aaPredicted RBP4.37□□□□□ -1.71
SMC4-205ENST00000465563 TMEM189-UBE2V1I3L0A0 370 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 ZNF197O14709 1029 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 H1F0P07305 194 aaKnown RBP4.37□□□□□ -1.71
SMC4-205ENST00000465563 ACADSP16219 412 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 TLX1P31314 330 aaPredicted RBP4.37□□□□□ -1.71
SMC4-205ENST00000465563 RPS18P62269 152 aaKnown RBP4.37□□□□□ -1.71
SMC4-205ENST00000465563 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 TCTEX1D4Q5JR98 221 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 ZDHHC20Q5W0Z9 365 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 DENND5BQ6ZUT9 1274 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 ZNF534Q76KX8 674 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 TSPAN33Q86UF1 283 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 CRYBG2Q8N1P7 616 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 ESX1Q8N693 406 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 ZNF383Q8NA42 475 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 MAGED4Q96JG8 741 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 LAT2Q9GZY6 243 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 DENND2DQ9H6A0 471 aaPredicted RBP4.37□□□□□ -1.71
SMC4-205ENST00000465563 MIOSQ9NXC5 875 aa4.37□□□□□ -1.71
SMC4-205ENST00000465563 TMCC2O75069 709 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 EIF3JO75822 258 aaKnown RBP4.36□□□□□ -1.71
SMC4-205ENST00000465563 PBX3P40426 434 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 TUBP50607 506 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 GOLGA8DPQ0D2H9 430 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 ACAD10Q6JQN1 1059 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 HACE1Q8IYU2 909 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 DNAJC22Q8N4W6 341 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 MORC4Q8TE76 937 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 TRPC4APQ8TEL6 797 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 P2RY12Q9H244 342 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 FAM120CQ9NX05 1096 aaKnown RBP4.36□□□□□ -1.71
SMC4-205ENST00000465563 FLRT3Q9NZU0 649 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 CSAG2Q9Y5P2 127 aa4.36□□□□□ -1.71
SMC4-205ENST00000465563 DNM1LO00429 736 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 CDC123O75794 336 aaPredicted RBP4.35□□□□□ -1.71
SMC4-205ENST00000465563 SPARCP09486 303 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 PIK3CAP42336 1068 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 CDR2Q01850 454 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 RIGQ13278 110 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 HNRNPDQ14103 355 aaKnown RBP4.35□□□□□ -1.71
SMC4-205ENST00000465563 P2RY6Q15077 328 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 MEP1AQ16819 746 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 CYP4A22Q5TCH4 519 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 KLC3Q6P597 504 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 PSRC1Q6PGN9 363 aaPredicted RBP4.35□□□□□ -1.71
SMC4-205ENST00000465563 ERC1Q8IUD2 1116 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 CEP97Q8IW35 865 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 AGXT2Q9BYV1 514 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 POLR1BQ9H9Y6 1135 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 TSPYL4Q9UJ04 414 aa4.35□□□□□ -1.71
SMC4-205ENST00000465563 PYGLP06737 847 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 MSH2P43246 934 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms