RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 LILRA3Q8N6C8 439 aaPredicted RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 AVL9Q8NBF6 648 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 SEC14L1Q92503 715 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 TCF12Q99081 682 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 SCNM1Q9BWG6 230 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 VPS37BQ9H9H4 285 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 IL1RAPL1Q9NZN1 696 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 ZNF624Q9P2J8 865 aaPredicted RBP19.93■□□□□ 0.78
SKA3-205ENST00000465471 KLK13Q9UKR3 277 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 ACSL5Q9ULC5 683 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 NEUROG3Q9Y4Z2 214 aa19.93■□□□□ 0.78
SKA3-205ENST00000465471 TRBV23OR9-2A0A075B6M9 112 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 A0A1W2PQM1 296 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 RHPN2P1A8MT19 583 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 PRMT5O14744 637 aaPredicted RBP19.92■□□□□ 0.78
SKA3-205ENST00000465471 SLC19A1P41440 591 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 ELK3P41970 407 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 HHEXQ03014 270 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 CALCOCO2Q13137 446 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 STEAP4Q687X5 459 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 SLC9B2Q86UD5 537 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 CILP2Q8IUL8 1156 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 CCNJLQ8IV13 435 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 LMNTD2Q8IXW0 634 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 DCBLD1Q8N8Z6 715 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.92■□□□□ 0.78
SKA3-205ENST00000465471 NOA1Q8NC60 698 aaKnown RBP19.92■□□□□ 0.78
SKA3-205ENST00000465471 LPGAT1Q92604 370 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 ART4Q93070 314 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 LRRC1Q9BTT6 524 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 COG4Q9H9E3 785 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 UCK1Q9HA47 277 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 CPNE7Q9UBL6 633 aa19.92■□□□□ 0.78
SKA3-205ENST00000465471 CTAGE15A4D2H0 777 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 B4GAT1O43505 415 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 TCEA3O75764 348 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 FTH1P02794 183 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 OR56A5P0C7T3 313 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 CTAGE8P0CG41 777 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 SPINK2P20155 84 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 ADARP55265 1226 aaKnown RBP19.91■□□□□ 0.78
SKA3-205ENST00000465471 CCL7P80098 99 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 SPANXN3Q5MJ09 141 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
SKA3-205ENST00000465471 ZDHHC24Q6UX98 284 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 CENPUQ71F23 418 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 CTAGE6Q86UF2 777 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 LRRC6Q86X45 466 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 CTAGE4Q8IX94 777 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 LRRN3Q9H3W5 708 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 POT1Q9NUX5 634 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 ANGPTL2Q9UKU9 493 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 CHMP2BQ9UQN3 213 aa19.91■□□□□ 0.78
SKA3-205ENST00000465471 OR52A4PA6NMU1 304 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 NDUFS3O75489 264 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 MT-CO3P00414 261 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 RPLP0P05388 317 aaKnown RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 PDX1P52945 283 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 CAV1Q03135 178 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 RPA4Q13156 261 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 SQSTM1Q13501 440 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 FRG1Q14331 258 aaKnown RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 TRADDQ15628 312 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 RPE65Q16518 533 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 ZNF470Q6ECI4 717 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 CAPRIN2Q6IMN6 1127 aaKnown RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 CCNI2Q6ZMN8 369 aaPredicted RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 UNC5AQ6ZN44 842 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 SDCCAG8Q86SQ7 713 aaPredicted RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 CFAP206Q8IYR0 622 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 UNC5BQ8IZJ1 945 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 SH3KBP1Q96B97 665 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 RMDN2Q96LZ7 410 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 BIRC8Q96P09 236 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 CARD6Q9BX69 1037 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 PHACTR1Q9C0D0 580 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 WWP1Q9H0M0 922 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 ABCG4Q9H172 646 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 OR52A5Q9H2C5 316 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 STN1Q9H668 368 aaKnown RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 C20orf96Q9NUD7 363 aaPredicted RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 INTS10Q9NVR2 710 aaKnown RBP19.9■□□□□ 0.78
SKA3-205ENST00000465471 CLCA2Q9UQC9 943 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 MSRB2Q9Y3D2 182 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 AKAP13Q12802 2813 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 KNTC1P50748 2209 aa19.9■□□□□ 0.78
SKA3-205ENST00000465471 IGHV1OR21-1A0A087WYE8 117 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 LILRA5A6NI73 299 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 D6RAR5 112 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 F8W8V4 182 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 LIN7AO14910 233 aaPredicted RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 S1PR4O95977 384 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 HALP42357 657 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 SLC1A2P43004 574 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 EPHA4P54764 986 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 OR1D5P58170 312 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 SLC7A5Q01650 507 aa19.89■□□□□ 0.77
SKA3-205ENST00000465471 PDIA2Q13087 525 aaKnown RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 FASTKD3Q14CZ7 662 aaKnown RBP19.89■□□□□ 0.77
SKA3-205ENST00000465471 CTSL3PQ5NE16 218 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms