RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 PGAM1P18669 254 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 MAPK9P45984 424 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 GPR3P46089 330 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 GSTM4Q03013 218 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 TARDBPQ13148 414 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 LONRF1Q17RB8 773 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 METRNLQ641Q3 311 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 PTRHD1Q6GMV3 140 aaKnown RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 C8orf74Q6P047 294 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 ABRAXAS1Q6UWZ7 409 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 WASH2PQ6VEQ5 465 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 ZNF438Q7Z4V0 828 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 MNS1Q8NEH6 495 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 ELMO1Q92556 727 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 SIGLEC10Q96LC7 697 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 FCRL3Q96P31 734 aaPredicted RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 NAT9Q9BTE0 207 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 WWP1Q9H0M0 922 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 COG4Q9H9E3 785 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 WASH6PQ9NQA3 447 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 C20orf96Q9NUD7 363 aaPredicted RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 POT1Q9NUX5 634 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 IMP3Q9NV31 184 aaKnown RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 IL1RAPL1Q9NZN1 696 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 SCHIP1Q9P0W5 487 aaPredicted RBP11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 WDR37Q9Y2I8 494 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 MSRB2Q9Y3D2 182 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 MRFAP1Q9Y605 127 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 PRSS21Q9Y6M0 314 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 NCOR2Q9Y618 2525 aa11.8□□□□□ -0.52
RPUSD3-211ENST00000464783 C17orf113A0A1B0GUU1 675 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 PRR19A6NJB7 356 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 PRMT5O14744 637 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CASC3O15234 703 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 TTC4O95801 387 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 BRAFP15056 766 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 ITGB6P18564 788 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 XRCC1P18887 633 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 ARNTP27540 789 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 SLC19A1P41440 591 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 UBE2IP63279 158 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 BOP1Q14137 746 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 KRT33BQ14525 404 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 NR1D2Q14995 579 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CLCA4Q14CN2 919 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 BRD3Q15059 726 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 HP1BP3Q5SSJ5 553 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CDCP2Q5VXM1 449 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 ZNF470Q6ECI4 717 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 NEPROQ6NW34 567 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CCNI2Q6ZMN8 369 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 TMEM135Q86UB9 458 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 DCBLD1Q8N8Z6 715 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 OR10G6Q8NH81 332 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 GABPB2Q8TAK5 448 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CFAP36Q96G28 342 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 C12orf66Q96MD2 445 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 EBNA1BP2Q99848 306 aaKnown RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 WHRNQ9P202 907 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 GNPTGQ9UJJ9 305 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 ATXN7L1Q9ULK2 861 aaPredicted RBP11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 VPS9D1Q9Y2B5 631 aa11.79□□□□□ -0.52
RPUSD3-211ENST00000464783 A0A1W2PQM1 296 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 FAM221BA6H8Z2 402 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 D6RAR5 112 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 IFRD1O00458 451 aaPredicted RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 NTN3O00634 580 aaPredicted RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 LIN7AO14910 233 aaPredicted RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 B4GAT1O43505 415 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 DUX1O43812 170 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 CPNE6O95741 557 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 MTHFD1P11586 935 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 OGNP20774 298 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 ELK3P41970 407 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 PREPP48147 710 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 ARCN1P48444 511 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 GPLD1P80108 840 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 PDIA2Q13087 525 aaKnown RBP11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 CRYMQ14894 314 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 RPE65Q16518 533 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 ISXQ2M1V0 245 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 SPANXN3Q5MJ09 141 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
RPUSD3-211ENST00000464783 USP53Q70EK8 1073 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms