RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 RPH3AQ9Y2J0 694 aaPredicted RBP12.28□□□□□ -0.44
SNX17-205ENST00000464279 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX17-205ENST00000464279 PCDHA3Q9Y5H8 950 aa12.28□□□□□ -0.44
SNX17-205ENST00000464279 ABCA4P78363 2273 aa12.28□□□□□ -0.44
SNX17-205ENST00000464279 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.44
SNX17-205ENST00000464279 FER1L5A0AVI2 2057 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 TRGV8A0A0C4DH27 118 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CCDC66A2RUB6 948 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 ARHGAP42A6NI28 874 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 DFFAO00273 331 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CCL21O00585 134 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CPNE3O75131 537 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 EML2O95834 649 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 FTCDO95954 541 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 GM2AP17900 193 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CTNNA2P26232 953 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CDKN2BP42772 138 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 KIR3DL1P43629 444 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 TSFMP43897 325 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 PAPOLAP51003 745 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 KCNK10P57789 538 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 OTUD4Q01804 1114 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 FOXD4Q12950 439 aaPredicted RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 LRP8Q14114 963 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 GRM3Q14832 879 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 ACOX1Q15067 660 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 PAFAH1B3Q15102 231 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 TAZQ16635 292 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 FCRL6Q6DN72 434 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 MFSD7Q6UXD7 560 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 PRSS42Q7Z5A4 293 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 ZBTB2Q8N680 514 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 EXD1Q8NHP7 514 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 CASKIN2Q8WXE0 1202 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 NUS1Q96E22 293 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 FOXC2Q99958 501 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 ZNF552Q9H707 407 aaPredicted RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 OLAHQ9NV23 265 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 AMFRQ9UKV5 643 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 TCFL5Q9UL49 500 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 PRRC2AP48634 2157 aaKnown RBP12.27□□□□□ -0.45
SNX17-205ENST00000464279 RTTNQ86VV8 2226 aa12.27□□□□□ -0.45
SNX17-205ENST00000464279 MIF4GDA9UHW6 222 aaKnown RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 J3KR12 359 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 PRAMEF11O60813 436 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX17-205ENST00000464279 RAB40ALP0C0E4 278 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 CA5AP35218 305 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 Q0VFX4 171 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 SLC9A4Q6AI14 798 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 ARHGAP36Q6ZRI8 547 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 ZSWIM9Q86XI8 627 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 RCOR2Q8IZ40 523 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 GALNT16Q8N428 558 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 CLEC1AQ8NC01 280 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 COG1Q8WTW3 980 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 ALG3Q92685 438 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 MTFMTQ96DP5 389 aaKnown RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 SCARF2Q96GP6 870 aaPredicted RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 RBM41Q96IZ5 413 aaKnown RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 EXOC2Q96KP1 924 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 ZNF641Q96N77 438 aaPredicted RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 MAK16Q9BXY0 300 aaKnown RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 CHST8Q9H2A9 424 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 SP110Q9HB58 689 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 WASH6PQ9NQA3 447 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 SEMA3GQ9NS98 782 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 OGFRQ9NZT2 677 aa12.26□□□□□ -0.45
SNX17-205ENST00000464279 PACSIN2Q9UNF0 486 aaPredicted RBP12.26□□□□□ -0.45
SNX17-205ENST00000464279 A0A0U1RQS6 177 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 APOL1O14791 398 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 DDX3YO15523 660 aaKnown RBP12.25□□□□□ -0.45
SNX17-205ENST00000464279 SLC2A4P14672 509 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 NELFEP18615 380 aaKnown RBP12.25□□□□□ -0.45
SNX17-205ENST00000464279 AGAP20933 346 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 RWDD2BP57060 319 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 GBE1Q04446 702 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 IL10RBQ08334 325 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 GALNT2Q10471 571 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 CDC16Q13042 620 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 INO80DQ53TQ3 878 aaPredicted RBP12.25□□□□□ -0.45
SNX17-205ENST00000464279 TFDP3Q5H9I0 405 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 CACHD1Q5VU97 1274 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 FAM69BQ5VUD6 431 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 B3GNTL1Q67FW5 361 aaPredicted RBP12.25□□□□□ -0.45
SNX17-205ENST00000464279 IYDQ6PHW0 289 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
SNX17-205ENST00000464279 DPPA4Q7L190 304 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 BIVMQ86UB2 503 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 RAB43Q86YS6 212 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 RFX6Q8HWS3 928 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 CCDC50Q8IVM0 306 aa12.25□□□□□ -0.45
SNX17-205ENST00000464279 REXO1L1PQ8IX06 675 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms