RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 CAMK2BQ13554 666 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 DNAJC21Q5F1R6 531 aaKnown RBP15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 NEPROQ6NW34 567 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 PDIK1LQ8N165 341 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 LILRA3Q8N6C8 439 aaPredicted RBP15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 BBOF1Q8ND07 529 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 HM13Q8TCT9 377 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 TCF12Q99081 682 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 WHRNQ9P202 907 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
RAB11FIP3-208ENST00000464263 PRAMEF33A0A0G2JMD5 474 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 OR52A4PA6NMU1 304 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 POLBP06746 335 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 OR56A5P0C7T3 313 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 PGAM1P18669 254 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 CD1CP29017 333 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 BIRC2Q13490 618 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 TYSND1Q2T9J0 566 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 BBS9Q3SYG4 887 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 CAPRIN2Q6IMN6 1127 aaKnown RBP15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 MRNIPQ6NTE8 343 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 CENPUQ71F23 418 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 SDCCAG8Q86SQ7 713 aaPredicted RBP15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 ZNF761Q86XN6 746 aaPredicted RBP15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 AVL9Q8NBF6 648 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 SH3KBP1Q96B97 665 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 GFM1Q96RP9 751 aaKnown RBP15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 NAT9Q9BTE0 207 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 WWP1Q9H0M0 922 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 P2RY12Q9H244 342 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 DPH5Q9H2P9 285 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 VPS37BQ9H9H4 285 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 UCK1Q9HA47 277 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 PLAC1Q9HBJ0 212 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 FAM8A1Q9UBU6 413 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 TEX264Q9Y6I9 313 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 NCOR2Q9Y618 2525 aa15.09■□□□□ 0.01
RAB11FIP3-208ENST00000464263 KIF26BQ2KJY2 2108 aa15.08■□□□□ 0.01
RAB11FIP3-208ENST00000464263 IGHV1OR21-1A0A087WYE8 117 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 E7ESA3 106 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 PRMT5O14744 637 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 NDC80O14777 642 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 NDUFS3O75489 264 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 VIPP01282 170 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 FTH1P02794 183 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 ELK3P41970 407 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 HALP42357 657 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 ARL4CP56559 192 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 SPIDRQ14159 915 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 TRADDQ15628 312 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 RPE65Q16518 533 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 HIF1AQ16665 826 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 LONRF1Q17RB8 773 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 ISXQ2M1V0 245 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 HP1BP3Q5SSJ5 553 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 RBM44Q6ZP01 1051 aaKnown RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 CILP2Q8IUL8 1156 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 MMGT1Q8N4V1 131 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 LRRC39Q96DD0 335 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 DEPDC7Q96QD5 511 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 INSM2Q96T92 566 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 SLC38A3Q99624 504 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 WDR83Q9BRX9 315 aaKnown RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 LRRC1Q9BTT6 524 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 CARD6Q9BX69 1037 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 TMEM121BQ9BXQ6 578 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 RAB17Q9H0T7 212 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 OR52A5Q9H2C5 316 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 STN1Q9H668 368 aaKnown RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 COG4Q9H9E3 785 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 SLC40A1Q9NP59 571 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 POT1Q9NUX5 634 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 ATXN7L1Q9ULK2 861 aaPredicted RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 UTP11Q9Y3A2 253 aaKnown RBP15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 ENTPD2Q9Y5L3 495 aa15.08■□□□□ 0
RAB11FIP3-208ENST00000464263 IQCF5A8MTL0 148 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 D6RAR5 112 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 ZW10O43264 779 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 CSO75390 466 aaKnown RBP15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 TTC4O95801 387 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 S1PR4O95977 384 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 OGNP20774 298 aaKnown RBP15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 RPS3P23396 243 aaKnown RBP eCLIP15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 PDHA2P29803 388 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 PDX1P52945 283 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 ADARP55265 1226 aaKnown RBP15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 SLC7A5Q01650 507 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 CFHR1Q03591 330 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 CALCOCO2Q13137 446 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 RPA4Q13156 261 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 CRYMQ14894 314 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 ZNF789Q5FWF6 425 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 SPANXN3Q5MJ09 141 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 NKAIN2Q5VXU1 208 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 TMEM26Q6ZUK4 368 aa15.07■□□□□ 0
RAB11FIP3-208ENST00000464263 USP53Q70EK8 1073 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms