RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ZNF514Q96K75 400 aaPredicted RBP18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 ARHGAP9Q9BRR9 750 aa18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 WWP1Q9H0M0 922 aa18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 FBXO8Q9NRD0 319 aa18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 DNMT3AQ9Y6K1 912 aaPredicted RBP18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 BAHCC1Q9P281 2608 aa18.88■□□□□ 0.61
CCHCR1-210ENST00000464012 CCDC78A2IDD5 438 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 POLR1CO15160 346 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 STK17BO94768 372 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 MC4RP32245 332 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 HADHAP40939 763 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 PPP1CAP62136 330 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 POU6F1Q14863 301 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 ZRANB3Q5FWF4 1079 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 CACHD1Q5VU97 1274 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 KCTD11Q693B1 232 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 SLC35B2Q8TB61 432 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 ULK4Q96C45 1275 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 C12orf66Q96MD2 445 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 LRRC40Q9H9A6 602 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 ARNT2Q9HBZ2 717 aa18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 SIDT1Q9NXL6 827 aaKnown RBP18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 FEZ2Q9UHY8 353 aaPredicted RBP18.87■□□□□ 0.61
CCHCR1-210ENST00000464012 MGAT4DA6NG13 374 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 LDB2O43679 373 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 POLBP06746 335 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 SLC35G4P0C7Q5 338 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 PRSS56P0CW18 603 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 RALBP11234 206 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 MTHFD1P11586 935 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 CDKN1CP49918 316 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 SH3BP2P78314 561 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 P3H1Q32P28 736 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 LINC00303Q3SY05 128 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 BCL7AQ4VC05 210 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 METRNLQ641Q3 311 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 SNX20Q7Z614 316 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 KLHDC8BQ8IXV7 354 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 NLGN4XQ8N0W4 816 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 NXPE1Q8N323 547 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 RNF10Q8N5U6 811 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 LILRA3Q8N6C8 439 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 SPDYE1Q8NFV5 336 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 NLGN4YQ8NFZ3 816 aaPredicted RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 OR2L2Q8NH16 312 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 ELMO2Q96JJ3 720 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 COPS8Q99627 209 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 ZPBPQ9BS86 351 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 TSGA10Q9BZW7 698 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 ZNF768Q9H5H4 540 aaKnown RBP18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 PILRAQ9UKJ1 303 aa18.86■□□□□ 0.61
CCHCR1-210ENST00000464012 CFAP99D6REC4 459 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 SGTAO43765 313 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 KRT86O43790 486 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 GSE1Q14687 1217 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 TIPARPQ7Z3E1 657 aaKnown RBP18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 PRSS42Q7Z5A4 293 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 UNC5BQ8IZJ1 945 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 MED8Q96G25 268 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 ZDHHC12Q96GR4 267 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 OR6C1Q96RD1 312 aa18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 INSM2Q96T92 566 aaPredicted RBP18.85■□□□□ 0.61
CCHCR1-210ENST00000464012 LOC101059948A0A1B0GTJ6 334 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 AGAP14A8MT82 685 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 AP2A1O95782 977 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 ATP1B2P14415 290 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 PRLHRP49683 370 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 GSDMDP57764 484 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 TAS2R42Q7RTR8 314 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 ZNF605Q86T29 641 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 CFAP206Q8IYR0 622 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 EXD3Q8N9H8 876 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 OR52K1Q8NGK4 314 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 HM13Q8TCT9 377 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 KIAA1143Q96AT1 154 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 RMDN2Q96LZ7 410 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 SLC12A9Q9BXP2 914 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 ULBP3Q9BZM4 244 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 GPN2Q9H9Y4 310 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 NLE1Q9NVX2 485 aaPredicted RBP18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 ZDHHC3Q9NYG2 299 aa18.84■□□□□ 0.61
CCHCR1-210ENST00000464012 FASNP49327 2511 aaKnown RBP18.83■□□□□ 0.61
CCHCR1-210ENST00000464012 TOX3O15405 576 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 PSMD3O43242 534 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 LIASO43766 372 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 IFNB1P01574 187 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 ITGB2P05107 769 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 FAM87AP0C7U9 286 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 ZNF28P17035 718 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 ACRV1P26436 265 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 SNX1Q13596 522 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 TBR1Q16650 682 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 CCDC38Q502W7 563 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 KLHL35Q6PF15 583 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 XKR5Q6UX68 686 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 SERPINA9Q86WD7 417 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 RASGRP3Q8IV61 690 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 C1orf54Q8WWF1 131 aa18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 LINC00615Q96LM1 132 aaPredicted RBP18.83■□□□□ 0.6
CCHCR1-210ENST00000464012 ALS2CR12Q96Q35 445 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms