RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SLC23A2Q9UGH3 650 aa13.18□□□□□ -0.3
COMMD3-205ENST00000463688 PACSIN2Q9UNF0 486 aaPredicted RBP13.18□□□□□ -0.3
COMMD3-205ENST00000463688 JRKLQ9Y4A0 524 aa13.18□□□□□ -0.3
COMMD3-205ENST00000463688 MRFAP1Q9Y605 127 aa13.18□□□□□ -0.3
COMMD3-205ENST00000463688 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
COMMD3-205ENST00000463688 PRAMEF33A0A0G2JMD5 474 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 A0A1W2PNU3 283 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 PRR19A6NJB7 356 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 LDB2O43679 373 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 PRAMEF10O60809 474 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 OR56A5P0C7T3 313 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 MTHFD1P11586 935 aaKnown RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 MC4RP32245 332 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 PRLHRP49683 370 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ACY1Q03154 408 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 SEPT6Q14141 434 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 OASLQ15646 514 aaKnown RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 SEPT7Q16181 437 aaKnown RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 AFTPHQ6ULP2 937 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 PRSS42Q7Z5A4 293 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ESX1Q8N693 406 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 RCBTB1Q8NDN9 531 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ART4Q93070 314 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 PBKQ96KB5 322 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 RANBP9Q96S59 729 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ZNF768Q9H5H4 540 aaKnown RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 C10orf88Q9H8K7 445 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 RAB6BQ9NRW1 208 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
COMMD3-205ENST00000463688 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-205ENST00000463688 LAMA5O15230 3695 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 GOLGA6L10A0A0M3HER8 536 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 C9orf172C9J069 976 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 RPN2P04844 631 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 APRTP07741 180 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 FGF3P11487 239 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 HGFP14210 728 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 ITIH1P19827 911 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 PSMA3P25788 255 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 ACRV1P26436 265 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 CSF2RBP32927 897 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 PRAMEP78395 509 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 XIAPP98170 497 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 SEMA5AQ13591 1074 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 POU6F1Q14863 301 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 RPE65Q16518 533 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 SNAP47Q5SQN1 464 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 ZNF648Q5T619 568 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 ARHGAP40Q5TG30 622 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 SFTPA2Q8IWL1 248 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 NLGN4XQ8N0W4 816 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 PPHLN1Q8NEY8 458 aaKnown RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 NLGN4YQ8NFZ3 816 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 CDKN2AIPNLQ96HQ2 116 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 C12orf66Q96MD2 445 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 IL22Q9GZX6 179 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 MVB12BQ9H7P6 319 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 FANCEQ9HB96 536 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 IMP3Q9NV31 184 aaKnown RBP13.16□□□□□ -0.3
COMMD3-205ENST00000463688 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 LRP4O75096 1905 aa13.16□□□□□ -0.3
COMMD3-205ENST00000463688 IGLV3-16A0A075B6K0 115 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 KPNA5O15131 536 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
COMMD3-205ENST00000463688 METTL18O95568 372 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 EML2O95834 649 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 CCNYL3P0C7X3 344 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 CCL4P13236 92 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 NPY2RP49146 381 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 DRG2P55039 364 aaKnown RBP13.15□□□□□ -0.3
COMMD3-205ENST00000463688 GPR18Q14330 331 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 PACS1Q6VY07 963 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 HOOK3Q86VS8 718 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 ACVR1CQ8NER5 493 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 GABPB2Q8TAK5 448 aaPredicted RBP13.15□□□□□ -0.3
COMMD3-205ENST00000463688 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
COMMD3-205ENST00000463688 KIR3DX1Q9H7L2 352 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms