RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 KPNA5O15131 536 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 SGTAO43765 313 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 OR1I1O60431 355 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 ESR1P03372 595 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 RPS3P23396 243 aaKnown RBP eCLIP19.43■□□□□ 0.75e-8■□□□□ 11.3
COL9A3-204ENST00000463487 ADARP55265 1226 aaKnown RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 EIF3BP55884 814 aaKnown RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 TUBB4BP68371 445 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 RPA4Q13156 261 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 CUL1Q13616 776 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 FRG1Q14331 258 aaKnown RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 NFE2L1Q14494 772 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 TMED2Q15363 201 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 SMAD1Q15797 465 aaKnown RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 HSP90AA5PQ58FG0 334 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 METRNLQ641Q3 311 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 STEAP4Q687X5 459 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 ABRAXAS1Q6UWZ7 409 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 ERMP1Q7Z2K6 904 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 LDB1Q86U70 411 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-204ENST00000463487 IGDCC3Q8IVU1 814 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 IFT20Q8IY31 132 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 CFAP206Q8IYR0 622 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 GSDMBQ8TAX9 411 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 ELMO1Q92556 727 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 PRDM8Q9NQV8 689 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 LRIT1Q9P2V4 623 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 FAM8A1Q9UBU6 413 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 U3KQA8 63 aa19.43■□□□□ 0.7
COL9A3-204ENST00000463487 ARHGEF17Q96PE2 2063 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 A6NCN8 305 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 PRR19A6NJB7 356 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 GSTA2P09210 222 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 RPL10P27635 214 aaKnown RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 FASLGP48023 281 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 MAZP56270 477 aaKnown RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 HHEXQ03014 270 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 ZDHHC24Q6UX98 284 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 KIAA0408Q6ZU52 694 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 C17orf82Q86X59 251 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 RBM12BQ8IXT5 1001 aaKnown RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 ARL14Q8N4G2 192 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 SLC37A2Q8TED4 501 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 IFT81Q8WYA0 676 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 CCDC74AQ96AQ1 378 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 TMEM159Q96B96 161 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 CXorf40BQ96DE9 158 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 IARS2Q9NSE4 1012 aaKnown RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 POT1Q9NUX5 634 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 TOR4AQ9NXH8 423 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 IL1RAPL1Q9NZN1 696 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 FBXO5Q9UKT4 447 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 COMMD10Q9Y6G5 202 aa19.42■□□□□ 0.7
COL9A3-204ENST00000463487 CNOT1A5YKK6 2376 aaKnown RBP19.42■□□□□ 0.7
COL9A3-204ENST00000463487 IFRD1O00458 451 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-204ENST00000463487 VIPP01282 170 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 APOA4P06727 396 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 ERVK-10P10266 1014 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 MYF5P13349 255 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 SLC1A2P43004 574 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 GPR3P46089 330 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 ILF2Q12905 390 aaKnown RBP19.41■□□□□ 0.7
COL9A3-204ENST00000463487 MICALCLQ6ZW33 695 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 NAT14Q8WUY8 206 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 PATE1Q8WXA2 126 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 ADAMTS14Q8WXS8 1223 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 LPGAT1Q92604 370 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 CDKL2Q92772 493 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 CCDC97Q96F63 343 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-204ENST00000463487 FMO2Q99518 471 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 P2RY12Q9H244 342 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 COG4Q9H9E3 785 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 SARS2Q9NP81 518 aaKnown RBP19.41■□□□□ 0.7
COL9A3-204ENST00000463487 NSMCE4AQ9NXX6 385 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 ZFATQ9P243 1243 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 CPNE7Q9UBL6 633 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 DMGDHQ9UI17 866 aaKnown RBP19.41■□□□□ 0.7
COL9A3-204ENST00000463487 CRYL1Q9Y2S2 319 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 HEBP2Q9Y5Z4 205 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 PRSS21Q9Y6M0 314 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 RNF215Q9Y6U7 377 aa19.41■□□□□ 0.7
COL9A3-204ENST00000463487 E5RI56 91 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 SPAG6O75602 509 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 XRCC1P18887 633 aaPredicted RBP19.4■□□□□ 0.7
COL9A3-204ENST00000463487 MGAT5Q09328 741 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 CTBP1Q13363 440 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 BOP1Q14137 746 aaKnown RBP19.4■□□□□ 0.7
COL9A3-204ENST00000463487 KRT33BQ14525 404 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 FASTKD3Q14CZ7 662 aaKnown RBP19.4■□□□□ 0.7
COL9A3-204ENST00000463487 N4BP2L1Q5TBK1 243 aaPredicted RBP19.4■□□□□ 0.7
COL9A3-204ENST00000463487 SLCO6A1Q86UG4 719 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 DENND6AQ8IWF6 608 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 CNTN4Q8IWV2 1026 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 GALNT15Q8N3T1 639 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 ASZ1Q8WWH4 475 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 SLC38A3Q99624 504 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 CCDC3Q9BQI4 270 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 ZDHHC18Q9NUE0 388 aa19.4■□□□□ 0.7
COL9A3-204ENST00000463487 PIKFYVEQ9Y2I7 2098 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms