RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	UGT1A7	Q9HAW7	530 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A10	Q9HAW8	530 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UGT1A8	Q9HAW9	530 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	LATS2	Q9NRM7	1088 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	SMOX	Q9NWM0	555 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	UBP1	Q9NZI7	540 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	LCMT1	Q9UIC8	334 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	PSMD13	Q9UNM6	376 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	BTRC	Q9Y297	605 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	MED13	Q9UHV7	2174 aa		10.9	□□□□□ -0.66
PTPN7-204	ENST00000462815	CREBBP	Q92793	2442 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815		A0A0A6YYK5	440 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	APOL1	O14791	398 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	PPP1R12A	O14974	1030 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	CPNE3	O75131	537 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	PMPCB	O75439	489 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	PECAM1	P16284	738 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	NFKB1	P19838	968 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	SPAM1	P38567	509 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	HAL	P42357	657 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	PTGIR	P43119	386 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	KPNA2	P52292	529 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	WNT3A	P56704	352 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	TUBB4B	P68371	445 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	HSD11B2	P80365	405 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	ADCY2	Q08462	1091 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	TUBB2A	Q13885	445 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	MESD	Q14696	234 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	GPR19	Q15760	415 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZNF658B	Q4V348	819 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	PLEKHS1	Q5SXH7	462 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	GPRC6A	Q5T6X5	926 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	LRRC38	Q5VT99	294 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	FAM69B	Q5VUD6	431 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	FAM198B	Q6UWH4	519 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	LUZP1	Q86V48	1076 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	RHOT1	Q8IXI2	618 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	DSEL	Q8IZU8	1212 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	NAT14	Q8WUY8	206 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	SEC14L1	Q92503	715 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	SRPK1	Q96SB4	655 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	TUBB2B	Q9BVA1	445 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	ING2	Q9H160	280 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	TRABD	Q9H4I3	376 aa		10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	SAE1	Q9UBE0	346 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	FARSA	Q9Y285	508 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	LUC7L2	Q9Y383	392 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	CFAP20	Q9Y6A4	193 aa	Known RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.89	□□□□□ -0.67
PTPN7-204	ENST00000462815	OTOG	Q6ZRI0	2925 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	ARGFX	A6NJG6	315 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	OR2AG2	A6NM03	316 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	TTLL8	A6PVC2	850 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	AGAP14	A8MT82	685 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	VPS4B	O75351	444 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SCRG1	O75711	98 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	EPO	P01588	193 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	RAB40AL	P0C0E4	278 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	VCL	P18206	1134 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	CDKN2B	P42772	138 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	PGD	P52209	483 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	ITGA1	P56199	1179 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	UBASH3A	P57075	661 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	PTPRCAP	Q14761	206 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC1A5	Q15758	541 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	LDLRAP1	Q5SW96	308 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	FHL5	Q5TD97	284 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	ZNF385C	Q66K41	422 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	FBXO38	Q6PIJ6	1188 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	TMEM220	Q6QAJ8	160 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	MFSD7	Q6UXD7	560 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	FAM151B	Q6UXP7	276 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	CARF	Q8N187	725 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	BEND7	Q8N7W2	519 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC35G2	Q8TBE7	412 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SSC4D	Q8WTU2	575 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	IQCD	Q96DY2	449 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	RMDN2	Q96LZ7	410 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	DNAJC7	Q99615	494 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	NRTN	Q99748	197 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC25A23	Q9BV35	468 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	NUDT9	Q9BW91	350 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	CHST8	Q9H2A9	424 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	KIR3DX1	Q9H7L2	352 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	HRASLS2	Q9NWW9	162 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	FAM153A	Q9UHL3	310 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	SLC24A2	Q9UI40	661 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	VPS4A	Q9UN37	437 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	ESPL1	Q14674	2120 aa		10.88	□□□□□ -0.67
PTPN7-204	ENST00000462815	GLYATL1P3	A0A0U1RQE8	302 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	WIPF3	A6NGB9	483 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	TCP11X1	B4DZS4	312 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815		H3BMH7	237 aa		10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	BUD23	O43709	281 aa	Known RBP	10.87	□□□□□ -0.67
PTPN7-204	ENST00000462815	AGFG2	O95081	481 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms