RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HM13Q8TCT9 377 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 LIN37Q96GY3 246 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 RUNDC3BQ96NL0 473 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 TMEM74Q96NL1 305 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 CCM2Q9BSQ5 444 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 SEMA6CQ9H3T2 930 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 CATSPERZQ9NTU4 200 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 POT1Q9NUX5 634 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 FAM8A1Q9UBU6 413 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 ACSL5Q9ULC5 683 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 PMS2P1A4D2B8 440 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 SDR42E2A6NKP2 422 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 TMX2-CTNND1H3BSU7 103 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 CD3EAPO15446 510 aaKnown RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 VAPBO95292 243 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 MPOP05164 745 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 HALP42357 657 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 LSSP48449 732 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 MAP9Q49MG5 647 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 TRIM48Q8IWZ4 208 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 CFAP206Q8IYR0 622 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 OR10G6Q8NH81 332 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 CXorf40BQ96DE9 158 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 PRR11Q96HE9 360 aaPredicted RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 SIGLEC10Q96LC7 697 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 INSM2Q96T92 566 aaPredicted RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 TTC1Q99614 292 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 TRIM56Q9BRZ2 755 aaKnown RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 TBC1D10AQ9BXI6 508 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 WWP1Q9H0M0 922 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 POLR1BQ9H9Y6 1135 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 EPB41L5Q9HCM4 733 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.08
ERCC3-206ENST00000462306 SATB2Q9UPW6 733 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 AK5Q9Y6K8 562 aa15.52■□□□□ 0.08
ERCC3-206ENST00000462306 EPG5Q9HCE0 2579 aa15.52■□□□□ 0.07
ERCC3-206ENST00000462306 USP24Q9UPU5 2620 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 CCDC187A0A096LP49 1063 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 IGHV5-10-1A0A0J9YXX1 117 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 FAM237BA0A1B0GVD1 139 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 MAGEB16A2A368 324 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 QSOX1O00391 747 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 TTI1O43156 1089 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 BRINP1O60477 761 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 POLBP06746 335 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 GSTM1P09488 218 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 ARCN1P48444 511 aaKnown RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 LIMK2P53671 638 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 GABREP78334 506 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 GSTM4Q03013 218 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 GPR18Q14330 331 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 ST3GAL2Q16842 350 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 ANKRD20A4Q4UJ75 823 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 C3orf38Q5JPI3 329 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 AARS2Q5JTZ9 985 aaKnown RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 IZUMO3Q5VZ72 239 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 KIAA0930Q6ICG6 404 aaPredicted RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 CAPRIN2Q6IMN6 1127 aaKnown RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 CASC4Q6P4E1 433 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 PCGF5Q86SE9 256 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 TMEM135Q86UB9 458 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 HOOK3Q86VS8 718 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 RBM12BQ8IXT5 1001 aaKnown RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 SPATA4Q8NEY3 305 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 OR4D9Q8NGE8 314 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 GPR150Q8NGU9 434 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 WDR36Q8NI36 951 aaKnown RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 RMDN2Q96LZ7 410 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 FCRL3Q96P31 734 aaPredicted RBP15.51■□□□□ 0.07
ERCC3-206ENST00000462306 KRT12Q99456 494 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 DPYSL5Q9BPU6 564 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 TRIM51Q9BSJ1 452 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 COG4Q9H9E3 785 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 VPS37BQ9H9H4 285 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 OGFRQ9NZT2 677 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 TMEM9Q9P0T7 183 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 PDP2Q9P2J9 529 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 ANAPC5Q9UJX4 755 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 ZMIZ1Q9ULJ6 1067 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 WDFY3Q8IZQ1 3526 aa15.51■□□□□ 0.07
ERCC3-206ENST00000462306 FREM2Q5SZK8 3169 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 KIF26BQ2KJY2 2108 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 APC2O95996 2303 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 DUX1O43812 170 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 DXOO77932 396 aaKnown RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 MTHFD1P11586 935 aaKnown RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 PDHA2P29803 388 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 PPARGP37231 505 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 TTPAP49638 278 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 DHX34Q14147 1143 aaKnown RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 TMEM71Q6P5X7 295 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 WDR74Q6RFH5 385 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 IGF2-ASQ6U949 168 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 AHCYL2Q96HN2 611 aaKnown RBP15.5■□□□□ 0.07
ERCC3-206ENST00000462306 C12orf66Q96MD2 445 aa15.5■□□□□ 0.07
ERCC3-206ENST00000462306 STRADBQ9C0K7 418 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms