RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 B3GNT8Q7Z7M8 397 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 RBM12BQ8IXT5 1001 aaKnown RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 MPP5Q8N3R9 675 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 CLDN19Q8N6F1 224 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 NAT8LQ8N9F0 302 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 KDF1Q8NAX2 398 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 TRIM44Q96DX7 344 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SERPINB12Q96P63 405 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 KRT12Q99456 494 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 TBC1D10AQ9BXI6 508 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 WWP1Q9H0M0 922 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 EPB41L1Q9H4G0 881 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 UCK1Q9HA47 277 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 RDH14Q9HBH5 336 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 TREX1Q9NSU2 369 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 POT1Q9NUX5 634 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 AKAP7Q9P0M2 348 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF624Q9P2J8 865 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
TRAPPC12-213ENST00000461577 LILRA5A6NI73 299 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 PFDN6O15212 129 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 TTI1O43156 1089 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 NDUFS3O75489 264 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 VAPBO95292 243 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 MPOP05164 745 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 AMD1P17707 334 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 RBMS1P29558 406 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 CCKBRP32239 447 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 TTPAP49638 278 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 PDX1P52945 283 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 DHX34Q14147 1143 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 KRT33BQ14525 404 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 ST3GAL2Q16842 350 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMEM71Q6P5X7 295 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMEM26Q6ZUK4 368 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 SDCCAG8Q86SQ7 713 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 HOOK3Q86VS8 718 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 JAMLQ86YT9 394 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 FBXO39Q8N4B4 442 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 WDR36Q8NI36 951 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 NCSTNQ92542 709 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 ELMO1Q92556 727 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF669Q96BR6 464 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 LIN37Q96GY3 246 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 C16orf45Q96MC5 204 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 C12orf66Q96MD2 445 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 NUDT22Q9BRQ3 303 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 TSSK1BQ9BXA7 367 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 SEMA6CQ9H3T2 930 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 COG4Q9H9E3 785 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 POLR1BQ9H9Y6 1135 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 IMP3Q9NV31 184 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 HEBP2Q9Y5Z4 205 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 MAD1L1Q9Y6D9 718 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 PRSS21Q9Y6M0 314 aa10.37□□□□□ -0.75
TRAPPC12-213ENST00000461577 BPTFQ12830 3046 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 KIF26BQ2KJY2 2108 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 FAM237BA0A1B0GVD1 139 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 AGRPO00253 132 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 IFRD1O00458 451 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR1I1O60431 355 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 BRINP1O60477 761 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 UBXN7O94888 489 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 MTHFD1P11586 935 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TYRP1P17643 537 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 LSSP48449 732 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 LIMK2P53671 638 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZFP36L1Q07352 338 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 EIF3IQ13347 325 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 SQSTM1Q13501 440 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TRA2AQ13595 282 aaKnown RBP eCLIP10.36□□□□□ -0.751e-5■■■■□ 21.3
TRAPPC12-213ENST00000461577 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 SEMA3AQ14563 771 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 MORF4L2Q15014 288 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 PLCL1Q15111 1095 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 ANKRD20A4Q4UJ75 823 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 SYTL3Q4VX76 610 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 PTRHD1Q6GMV3 140 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 KIAA0930Q6ICG6 404 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 RAB11FIP2Q7L804 512 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMPRSS9Q7Z410 1059 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 LDB1Q86U70 411 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 LSMEM2Q8N112 164 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 LILRA3Q8N6C8 439 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR4D9Q8NGE8 314 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 GPR150Q8NGU9 434 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMEM159Q96B96 161 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 STAMBPL1Q96FJ0 436 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 CCDC74BQ96LY2 380 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 INSM2Q96T92 566 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TRIM51Q9BSJ1 452 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 TRIM31Q9BZY9 425 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 SLC40A1Q9NP59 571 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 MARCH4Q9P2E8 410 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms